Lodderomyces elongisporus: PVL30_003054
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Entry
PVL30_003054 CDS
T01116
Name
(RefSeq) uncharacterized protein
KO
K12816
pre-mRNA-processing factor 17
Organism
lel
Lodderomyces elongisporus
Pathway
lel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVL30_003054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lel03041
]
PVL30_003054
Spliceosome [BR:
lel03041
]
Complex C
Other components
Step II factors
PVL30_003054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_2nd
WD_LRWD1
Beta-prop_SPT8
Beta-prop_IFT122_1st
B-prop_COPA_B_2nd
Beta-prop_VPS8
Beta-prop_IP5PC_F
Beta-prop_SCAP
MFS_3
Motif
Other DBs
NCBI-GeneID:
5232295
NCBI-ProteinID:
XP_001525640
UniProt:
A5E1T1
LinkDB
All DBs
Position
3:complement(2004700..2006346)
Genome browser
AA seq
548 aa
AA seq
DB search
MMSLVGDYASDSDNETNGSVSGHEDSNKIIDDIHSDIGDKVEPIRKKARLSEKDPENGEL
QVTKKEVEVEVEVEVESLHSSSSSSLKQKSPSPLLQQSPTPLHLKSEFEIEEEERKEAKR
KAKELKRRRKEKGNDPWTSYTDDFVVQPKVNTAFDTEHENGLAPNINRSAMKSEVENGDV
DDENEHEHERDDNGEGDASYEFKPTSELMRFSEDEVLKHQSLLQVPTKLQDKLRKPTKTW
RFPKSGIVQTIPLAHRKGVNKLQFIPHSGHLLLSCGNDNLIKLWRARQKDEKFELARIYR
GHRLAVKDICFNSTGDRFLSCGYDKIIRLWDTETGNVIKTIQVSSVPNVVRFRPEHENEF
IAGLSNHEIHHFDIESIQLQSPLQIYDHHVGSINDILVTNEGFISTADDKTMRVWKWRVN
SPTKAITGASLFSIPSVKKRPNSKHIVLQSMDNTIKVLDGGKYSWNKKKIFKGHHNAGYG
IEIDVAPDGKMVMSGDSRGFVFFWDWEMKKVQLKLKLSDRPIKSVAVQPLKTSSIAAAGI
SGDIYYCS
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccttagttggtgattatgcatctgattcagataatgaaacgaatggatctgtc
agtggtcacgaagattccaacaaaattatcgatgacattcattccgatattggtgataag
gtagagcctatacgtaagaaagcacgactttctgaaaaagatccagaaaatggagaactc
caagtaacaaagaaagaagtggaagtggaagtggaagtggaagtggaactgctacatctg
ctgctgctgctgctgctaaaacagaaatcaccgtcgccactattacagcaactgccaact
ccattgcatttaaaatcagagtttgagattgaagaagaagaacgtaaagaagccaaacgc
aaagccaaagaactcaaacgtcgtcgaaaagaaaaaggtaatgatccatggacttcttat
actgacgactttgttgtccaaccaaaagtaaatactgcatttgacacggaacacgaaaat
ggtctagcaccaaatattaatagatcagcaatgaaaagcgaagtagaaaatggtgatgtg
gatgatgaaaatgaacatgaacatgaacgtgacgataacggtgaaggtgacgcaagttat
gaattcaagcctacttcagagctcatgcgtttctcagaagacgaagtgttaaaacatcaa
tcacttcttcaagtccctacaaagttgcaagacaaattacgaaaacctacgaaaacttgg
cgttttcccaaaagtggaattgtacaaactattcctctcgcacatcgcaaaggtgtcaat
aagctacaattcattccacatctgggccatttactactctcttgtggaaacgataattta
ataaaattatggagggcacgacaaaaggatgaaaaattcgaacttgcacgaatctaccgt
ggacatagacttgccgtaaaggatatttgcttcaactccaccggtgatcgcttcctcagt
tgtgggtacgataaaataatacgtttatgggatacagaaactggcaatgtgataaagaca
attcaagtatcctccgttcccaatgttgttcggttccgtcccgagcacgaaaatgagttt
attgcaggcttgtccaaccacgaaatccatcatttcgatattgagtccattcaacttcaa
tcacctttacaaatctacgaccatcacgttggttccataaatgacatattagtaaccaat
gaaggtttcatctctacagccgatgacaaaacaatgcgagtttggaaatggagggtcaac
tcgcctacaaaagccataaccggagcctctcttttctctataccatcagtgaagaaacgc
ccaaactcgaaacatattgtcttacaaagtatggacaacacaataaaagtgttggatgga
gggaaatactcatggaataaaaagaaaatattcaaaggccaccataacgcgggttatgga
attgagattgatgtcgcacccgatggcaaaatggtgatgagtggcgattcacgaggcttt
gtatttttctgggattgggaaatgaaaaaagtacagctcaaattgaaattgagcgaccgt
cctataaagagtgttgctgtgcagccattgaaaacatctagtatcgcagcagctggtata
tcgggtgatatttactattgctcgtaa
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