Lodderomyces elongisporus: PVL30_003148
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Entry
PVL30_003148 CDS
T01116
Symbol
HAT2
Name
(RefSeq) Histone acetyltransferase type B subunit 2
KO
K10752
histone-binding protein RBBP4
Organism
lel
Lodderomyces elongisporus
Pathway
lel03082
ATP-dependent chromatin remodeling
lel03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PVL30_003148 (HAT2)
03083 Polycomb repressive complex
PVL30_003148 (HAT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lel03036
]
PVL30_003148 (HAT2)
Chromosome and associated proteins [BR:
lel03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
PVL30_003148 (HAT2)
Histone modification proteins
HAT complexes
HATB complex
PVL30_003148 (HAT2)
HDAC complexes
Sin3A-HDAC complex
PVL30_003148 (HAT2)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
PVL30_003148 (HAT2)
PRC2.2
PVL30_003148 (HAT2)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
PVL30_003148 (HAT2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
PVL30_003148 (HAT2)
Chromatin remodeling factors
NuRD complex
PVL30_003148 (HAT2)
NuRF complex
PVL30_003148 (HAT2)
NuRF complex (fruit fly)
PVL30_003148 (HAT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_EML
WD40_MABP1-WDR62_2nd
MIOS_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_1st
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
5232512
NCBI-ProteinID:
XP_001525741
UniProt:
A5E232
LinkDB
All DBs
Position
3:complement(2297366..2298553)
Genome browser
AA seq
395 aa
AA seq
DB search
MAEEIAPGSETKELSIKEEYQLWRKNCRYMYEFVSETALTWPSLTIQWLPNHTTQDGVIN
TSLLLGTHTSGNDTNYLKVAETQISADGTATANSRIKITKKFENTQEICRARYMPQDTNI
VGTINGSGQVDLYKLDSEDKSSYHHFSPHSENGYGLSWNPLEKGLLLTAADDGLACVTDV
LGSYKTTVFKSSTNTDIVNDAKWHFFDKSIFATVSEDEYAYIFDTRTTEPVAKYHAEGSK
GINSLAFSPFSRNLLAIGSTNSNISLLDTRKLDNKNGTAGLLHTMMGHTDGITSMDFSPH
KDGILASGSQDRRLILWDLTKIGEEQQQEDAEDGCPELFMMHAGHTAGVTDLSWCPFREW
TIGSVADDNIVHLWEVSKSLINDPSNEEVDPSILE
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaaattgcaccgggcagcgagaccaaagagttgtccatcaaagaagagtat
caactatggaggaagaattgccgttacatgtacgagtttgttagtgagactgctcttaca
tggccttcactcaccatccaatggcttcccaaccacacaactcaagacggagtgataaac
acaagcttattacttggaacacacacatctggtaatgataccaactacttgaaagttgca
gaaacccaaatctcagccgatggcacggctacggctaactcaaggattaaaatcaccaag
aaattcgaaaacacacaagagatatgtcgagctagatacatgccacaagatacaaacata
gtaggtacaatcaatgggtctggccaagtcgacctttataagttggatagcgaagataag
ctgagctaccaccatttcagcccgcattcggaaaatggatatgggctttcttggaatcca
cttgagaagggacttttattgacagcagctgacgatggacttgcttgtgttacggatgtt
ttaggatcttacaaaacaacagtatttaaaagctctaccaacaccgatatcgtcaatgat
gccaaatggcactttttcgataagagtatatttgcaactgtctccgaggatgaatatgct
tatatatttgataccagaaccacggaaccagtggccaagtaccatgcagaagggtccaaa
gggatcaattcgcttgcattttctccattctctcgaaatcttttggctataggtagcaca
aactctaatattagtttattggacacgagaaaattggataataaaaatggaactgctggt
ttattacacacgatgatgggtcataccgatggtattactagtatggacttctctccacac
aaggacggaatacttgcatctggaagtcaagacaggagactaatcttgtgggacttgacc
aagattggagaagaacagcaacaagaggatgcagaggatgggtgtccagaattgtttatg
atgcacgcgggtcacacggcgggtgtgacggatttgagttggtgtccatttagagaatgg
actattgggtctgttgccgatgacaatattgtgcacttgtgggaggttagtaaaagtttg
atcaacgatccgctgaacgaagaggtcgatcccagtatactcgaataa
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