KEGG   Lodderomyces elongisporus: PVL30_003284
Entry
PVL30_003284      CDS       T01116                                 
Symbol
sap49
Name
(RefSeq) Spliceosome-associated protein 49
  KO
K12831  splicing factor 3B subunit 4
Organism
lel  Lodderomyces elongisporus
Pathway
lel03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lel00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PVL30_003284 (sap49)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lel03041]
    PVL30_003284 (sap49)
Spliceosome [BR:lel03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    PVL30_003284 (sap49)
 Complex B
    PVL30_003284 (sap49)
 Complex C
   U2 SnRNP specific factors
    PVL30_003284 (sap49)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_10 RBD_AKAP-17A RRM_7 Nup35_RRM_2
Other DBs
NCBI-GeneID: 5233293
NCBI-ProteinID: XP_060975442
LinkDB
Position
4:join(357407..357413,357440..358086)
AA seq 217 aa
MPQCSELLMYELFSQFGPIRNINMPKDRVSKMHQGYGFVEFKDARDAKYTEDILRGVRLY
GKLLKLKKLDSKPSTQYQSERSVGTYVTPKSDLSNDRYVDVGAKLYISNLNPLIDEKFLL
QTFSNFGTVIKQPVIRRDLEGKSMGSGFITFADFETSDEVIEKMNNTILMNSKISLAYAF
KEGATKGGKKIRHGDKAERILAESAKKNGFSRSKKSR
NT seq 654 nt   +upstreamnt  +downstreamnt
atgcctcaatgtctggaacttcttatgtatgagcttttctctcagtttggtcccatcaga
aatatcaacatgcccaaggatagagtttctaaaatgcatcagggatatggttttgttgag
ttcaaggatgcacgcgatgcaaagtatacagaggatatattgcgaggtgtccgactatat
ggaaaactactcaaattgaaaaaattggattccaaaccatctacccaataccagtcagaa
agatcagtggggacatacgttactcccaagctggatttgctgaacgacagatatgtggat
gttggagccaaattgtacataagtaatttgaacccattaattgatgaaaagttcctattg
caaacatttctgaattttggtacagttatcaagcaaccggtgattcgtcgtgaccttgaa
ggtaagtcaatgggcagtggttttattacttttgccgattttgaaaccagtgacgaggta
atagaaaaaatgaacaacactattttgatgaattcgaaaataagtttagcatatgcattt
aaagaaggtgcaaccaaaggtgggaagaagatcagacatggcgacaaggcagaacgaata
cttgctgaatctgctaaaaagaacggttttctgcggtccaaaaagctgaggtga

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