Lodderomyces elongisporus: PVL30_003286
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Entry
PVL30_003286 CDS
T01116
Symbol
ssb2
Name
(RefSeq) Replication factor A protein 2
KO
K10739
replication factor A2
Organism
lel
Lodderomyces elongisporus
Pathway
lel03030
DNA replication
lel03420
Nucleotide excision repair
lel03430
Mismatch repair
lel03440
Homologous recombination
lel03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PVL30_003286 (ssb2)
03420 Nucleotide excision repair
PVL30_003286 (ssb2)
03430 Mismatch repair
PVL30_003286 (ssb2)
03440 Homologous recombination
PVL30_003286 (ssb2)
03460 Fanconi anemia pathway
PVL30_003286 (ssb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lel03032
]
PVL30_003286 (ssb2)
03400 DNA repair and recombination proteins [BR:
lel03400
]
PVL30_003286 (ssb2)
DNA replication proteins [BR:
lel03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
PVL30_003286 (ssb2)
DNA repair and recombination proteins [BR:
lel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
PVL30_003286 (ssb2)
MMR (mismatch excision repair)
PVL30_003286 (ssb2)
DSBR (double strand breaks repair)
HR (homologous recombination)
PVL30_003286 (ssb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
Hmw_CFAP97
HTH_36
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
5233307
NCBI-ProteinID:
XP_001525885
UniProt:
A5DYK6
LinkDB
All DBs
Position
4:complement(364105..364893)
Genome browser
AA seq
262 aa
AA seq
DB search
MSEYGNFGNYGGNYGDGGFTNTGYSQGGFSNENGSQSGGTKTQGRSSLTPVTIKQILEAT
QATPDGDFSVHNVTLSMISFVGVVRKVDGQGMSVIITVEDGTGSIDVRKWVDESTTSLAV
ETEKYSAFKNKYVFVGGSLKLHMNKKSIQNAAIALIEDSNQIIYHHLSAIDHHLKSQGLP
KSSGANTDGDLFVKDEDSNESLMNRVLKFITEESKTMQDGVPINYIAEKLGISKDEGLRQ
CNELIENGRIYLGFNDGGYIAV
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatacggtaattttggaaattatggaggcaactatggtgatggagggttcacc
aatactggctattctcaaggtggatttagcaatgaaaatggttcacaatcaggtggtacg
aaaacacaaggtcgttcgagtctaacaccagttacaatcaaacagattttagaagcaaca
caagcaacaccagacggggacttcctggtacacaacgttactctcagcatgattagtttt
gttggagttgtgcgtaaagttgatggtcaaggaatgagtgtgatcatcaccgttgaggac
ggtacgggatccatcgatgttcgtaaatgggtagatgaaagtaccacttcattggctgtt
gaaactgaaaaatactcagctttcaagaacaagtacgtttttgttggcggatctttgaaa
ttgcacatgaacaaaaagagtattcagaatgctgccatagcattaatcgaagatagcaat
caaattatttatcatcatttaagcgccattgatcatcacttgaagagccaaggacttccc
aaaagcagtggtgcaaacacagatggtgatttatttgtcaaggacgaagattccaatgaa
tctttgatgaacagagttttgaaatttatcacagaggagagtaagactatgcaagatggt
gttccaataaactacattgccgagaagctaggaatttccaaagacgaaggtttgagacag
tgtaatgagttaattgagaatggaagaatctacctagggtttaatgatggaggctacatt
gctgtttaa
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