Lodderomyces elongisporus: PVL30_003288
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Entry
PVL30_003288 CDS
T01116
Symbol
ssr3
Name
(RefSeq) SWI/SNF and RSC complex subunit Ssr3
KO
K11775
SWI/SNF complex component SWP73
Organism
lel
Lodderomyces elongisporus
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lel03021
]
PVL30_003288 (ssr3)
03036 Chromosome and associated proteins [BR:
lel03036
]
PVL30_003288 (ssr3)
Transcription machinery [BR:
lel03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
PVL30_003288 (ssr3)
Chromosome and associated proteins [BR:
lel03036
]
Eukaryotic type
Chromatin remodeling factors
SWI/SNF complex
PVL30_003288 (ssr3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DUF3334
Motif
Other DBs
NCBI-GeneID:
5233604
NCBI-ProteinID:
XP_001525887
UniProt:
A5DYK8
LinkDB
All DBs
Position
4:complement(368189..369646)
Genome browser
AA seq
485 aa
AA seq
DB search
MSQRNGLPTVSYSPTDITIPQSIYDKIPNLEDYKNLKEAERKIDLLIARKALDFQAIQQK
TIHPFEYKSNTGLLRVFVYNTCENQPWQKQLQQQQQQQQQQQQQTEYVPDPNAEPTWTLR
VEGKFIGDNKVEATESSRLKFSTFLSAASIDLLPNEHYPNLEESQQNIIEWRDDGSNNAM
RNPSIDTSFDGLDVKRNGLHNIKVKIALLLKSYSSKLQLSDEMAQFIGKTECTQQEAMYT
IWIYVLWNKLLKNTEEYMHVPAVENHSMSSSDKSGAGAGVGAGVGVGVGVGAGAGVAGTG
SGDINNDFSLTVADDTLFELLKVREFTFKDLYRLIQPHFKPREPVMIEYEVDTRTSNTLG
NLIVDIPVELPINLSQAQKELLELNKSAFETLSQHDAMIEKLNQKISLAIIALRNANSRE
IFFSELSKDPVGFIQKWLETQSETLKALKSDEGYDEEVVRRAQYFIDNEDMIKEKIDLLF
GASKF
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaagaaatggattgcccaccgtctcatactccccaacggatataactatacct
cagtctatctatgataaaatcccgaatctcgaagattacaaaaatttgaaagaagccgaa
cgaaagattgatttacttattgccagaaaggcactcgatttccaagccattcaacaaaag
accattcacccatttgagtacaagtcaaatacgggattgttgagagtgtttgtgtacaat
acttgtgagaaccaaccttggcagaaacagttgcaacaacaacaacaacaacaacaacaa
cagcaacagcaaactgaatatgtgcctgatcctaatgccgaaccaacgtggactttgaga
gtagagggtaaattcattggtgacaataaagttgaagctacagagtcgagtagattaaag
tttagcacatttttatcagcggcatcaatagatttacttcccaatgaacactatccgaac
ctagaggaatcacaacaaaatattatagaatggagagatgatggatctaataatgcaatg
cgaaatccatcaatcgatacaagctttgatggtctcgacgtgaaaagaaatggccttcac
aatattaaagtaaagattgcgctactacttaaaagttactcgtcaaagttgcagttgtca
gatgagatggctcaattcattggaaagacagagtgcactcaacaagaggccatgtacaca
atatggatctatgttttgtggaataaacttttgaaaaacaccgaggagtatatgcacgtt
cctgctgttgaaaatcacagtatgtctctgagcgacaagtccggagcaggtgctggcgta
ggtgctggagttggagttggagttggagttggtgcgggtgcgggagttgcaggtacaggt
tctggggatataaacaacgatttctcgctaactgttgccgatgacacgttgtttgagtta
ttgaaagtgcgcgagtttacgttcaaagacttgtacaggctcatacaaccacatttcaaa
ccccgagagccagtgatgattgaatatgaagtagatacgagaacttccaatactttggga
aacttgattgtggatatcccagtggaattgccaatcaatctttcgcaagcgcagaaggaa
ttattagagcttaacaagagtgcgtttgagacattatctcaacacgatgcaatgattgaa
aagcttaaccaaaagatatcgcttgctatcattgccttgcgaaacgctaattcaagggaa
atatttttcagtgaattaagcaaggatccagttggattcatacagaaatggttggaaact
caatctgagacattgaaggcattaaagagtgatgaaggatacgacgaggaggttgttaga
agagctcaatatttcatcgacaatgaagatatgattaaagagaaaatcgaccttttattc
ggagcaagtaagttttag
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