Lodderomyces elongisporus: PVL30_003309
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Entry
PVL30_003309 CDS
T01116
Symbol
RCL1
Name
(RefSeq) rRNA-processing endoribonuclease
KO
K11108
RNA 3'-terminal phosphate cyclase-like protein
Organism
lel
Lodderomyces elongisporus
Pathway
lel03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PVL30_003309 (RCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lel03009
]
PVL30_003309 (RCL1)
Ribosome biogenesis [BR:
lel03009
]
Eukaryotic type
90S particles
Other 90S particles
PVL30_003309 (RCL1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RTC
RTC_insert
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-GeneID:
5233100
NCBI-ProteinID:
XP_001525911
UniProt:
A5DYN2
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All DBs
Position
4:complement(426347..427492)
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AA seq
381 aa
AA seq
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MSSKKDVVTFEGHKNFRLRIILSTLSGKPVKITKIRSNSLNPGLKDYEVSFLRLIESVTN
GSHIEISYTGSTVIYRPGIIIGGEITHNCPLSKPVGYFIEPALMLAPFSKKKFSILFKGL
TNSPNEVSVDTIKWGFLPIMEKFGVRDCLLHILKRGSPPLGGGEVHLVCNSLLPVPLTIH
AIEVPKFSAIRGVAYCTRVSPSTVNRMIDAARQVLKGTGCEVNIAADVWRGENAGKSPGF
GVTLVAESKRGFRISSDNVGAAQTLPEEVGETTAYQLMEEITTSGCVDRYQLPLCLVYMT
IGKEDIGRIKIHKSQVNEDLVYMLRDIKSIFGTEAFLKSDDDDEADYSYDGGEKGRGNNG
DSFITLSLKGSGFVNIAKKVA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgaagaaagatgtggttacatttgaaggacacaaaaatttccggttgagaata
attctttctactctttcaggaaaacctgtgaaaatcaccaaaatcagatcaaatagttta
aatccaggtttgaaagactacgaagtttccttcttgagactcatagaatctgtcactaat
ggatcgcacattgaaatctcatacactggttcaactgttatttacagacctggtattatc
attggtggggaaataactcacaactgtcctttgtcaaaacctgttggctatttcattgag
cccgcgttgatgttggctccgttttctaaaaagaagtttagtatacttttcaaaggattg
acaaacagtcccaatgaagtaagcgttgacacaattaaatggggattcttgcctataatg
gaaaagtttggtgtgcgagattgtttattgcatattcttaaacgtggctctccaccttta
ggcggaggcgaggtacatttggtttgtaactctttactaccggtacctttgactattcat
gccattgaagtaccaaaattctcagcaatcagaggtgttgcatattgtactagagtcagc
ccgtctacagttaataggatgatagatgccgcaagacaagttcttaagggaactggatgc
gaagtaaatattgcagcagatgtctggagaggtgaaaatgcaggtaagtctccaggattt
ggtgtcacgcttgttgccgaatcaaagagaggtttcagaatcctgagcgacaatgtcggt
gcagcccaaaccttaccagaagaagtcggtgagaccactgcctatcagttaatggaggag
attacaaccagcggatgtgtcgataggtaccaattacctctttgccttgtttatatgacc
attggtaaagaagatatcggaagaattaagattcacaagtcacaggttaatgaagattta
gtatacatgctccgagatattaaatcaatttttggaacagaggcgttcctcaagagcgat
gacgacgatgaagctgattatagctatgatggtggggaaaaaggccgtggcaataatggc
gacagtttcattacattaagtttaaagggaagtggatttgtaaacattgctaaaaaagta
gcgtag
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