Lodderomyces elongisporus: PVL30_003319
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Entry
PVL30_003319 CDS
T01116
Symbol
SWR1
Name
(RefSeq) swr1 complex component
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
lel
Lodderomyces elongisporus
Pathway
lel03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PVL30_003319 (SWR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lel03036
]
PVL30_003319 (SWR1)
Chromosome and associated proteins [BR:
lel03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
PVL30_003319 (SWR1)
SWR1 complex
PVL30_003319 (SWR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HSA
DEAD
Motif
Other DBs
NCBI-GeneID:
5233264
NCBI-ProteinID:
XP_001525922
UniProt:
A5DYP3
LinkDB
All DBs
Position
4:447979..453291
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AA seq
1770 aa
AA seq
DB search
MPNARTGKRSSSRLSQNTTSTSEDSFESSNLQRNKRQSPNPYANSNGNDNDSVDQQQEQP
QKKKPKTQGKTKEVQLATILTDFAEAVNELYQLLEYASIVAWKPNEFSENNPQQSLREHY
KAFCDDNNYRIKWNDEIEDDTSIKSLPLRFQRKKLTERENALQNMYPFRKEVFTLQKQME
ENRYISKKPEVNQKLNLDPQQQWQQGQQEQQEQQQEQQQEQLPGKSKSTTTNNKTNTSKK
VVKKVEPPPKSNDKLKSKPKSKHKPTLRAREIESSEIKEIEKNEKITEIYVATKESTDDK
LVEHSDDEEGLEVHEEQIEEEEEEEGEEEEEEGEEEEEEEEEKSDQSPNPHGVFHNNSKK
VSVSLTVPSLLITHPSHIPGWQPQPQDQMQTDIAATERDLQHLDYQPQTIRVTNLNNAQR
EVTSSLSQRLSTFLENRYKTPIIDEANAIDFAYTKEEYDEINKQQQKMFKDIYNKIYAEN
TLVFTNQKIERRKIVLPPSSSNFKLNDPFRNANAVSPKLPGTSNNMTFQDHLVAQGASFS
RIHHQMRKQHINRARKVALIVDQHFKRKRGEKERLQRERELSLKKLSRTVMQAVKRRWNE
AAKVYSIIQSEKDEELKKIKGREHLSQMLEHSTQLLEAQLISSREQTADAESNFDNSEMS
PSSDDFDASKDSDDYLSSSDSDDDNENNDYEGAKPLSKMSSNQNLTEISSTDDNDFNLSV
DELRKKYAGIEGSMEAAELSEIKTNDIKMKNLEDDDKNGINTKNASQELITNSESETTAL
SIKNGKMSGKTLMNESEDNLGSEVDNDSSDADAKPVSSLISLLGGGMEDSDDDDDDEDAE
LDSVYSSSDEEMSTSGDDDDDEKEEEEEKETEEEETEEKQKEKEEEVESEKDTEVGVEKE
VNGESKANNRETPISNGHVDDTHKESEEDTGAVEIINGAKVKDVPVPQLLRGTLRPYQKQ
GLNWLASLYNNNTNGILADEMGLGKTIQTISLLAYLACEHHVWGPHLIVVPTSVMLNWDM
EFKKFAPGFKVLTYYGSPQQRAQKRKGWFKPDAFHVCITSYQLVVQDQQAFKRKKWRYMI
LDEAHNIKNFRSTRWRALLNFNTENRLLLTGTPLQNNLMELWSLLYFLMPSSKANMAMPE
GFANLEDFQQWFGKPVDKILEQTTLTNNADLIDENEKTTSKMDEETRNTVSRLHQVLRPY
ILRRLKKDVEKQMPGKYEHIVYCRLSKRQRYLYDDFMSRAKTKETLMSGNFLSIINCLMQ
LRKVCNHPDLFEVRPIVTSFAMPEAVSSTYLAINSAVQNWTNGNAMDCVDLKVLNLDITR
HENLDYFVADSASKLVSITDFEKQIAQLKSVSSEVNTFENPHYVKSYQQLKALDQIEARD
KIQHVSYINKLRCNRKPIYGKSLLNKLKIVKPVDSNDTSIQLGITVSQRAELMTDAIEKF
SILTPAVVTLDLNNQMFSKSLQDRVHSEVLDGKILNPFHQSQVKLSIAFPDKTLLQYDCG
KLQKLATLMRDLVANGHRALIFTQMTKVLDILEQFLNIHGYRYMRLDGATKIEDRQLLTE
KFNRDPKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQVRDVHI
YRFVSEYTIESNIIKKANQKRQLDNVVIQEGEFTTDYFGKFSVRDLVSDSNVTDIAERTI
DFSGDSKMGSVLAQAEDEEDRAAAGAAMKEVAVDDEDFTEDANGRRENSDLALNTATAND
EGDADMDLDYDEGIGHIDEYMLRFISEGYL
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atgcctaatgccagaaccgggaaacggctgctgtcgagacttagtcagaatactacatct
acgtcagaagattcatttgaactgctgaatttgcaaagaaacaagaggcaaagtccaaac
ccgtatgcgaattccaatggtaatgataatgatagtgttgatcagcaacaggagcaacca
caaaaaaagaaaccaaagacccaaggcaagactaaggaagttcaattagcaaccatattg
actgactttgctgaagccgtgaacgaattatatcaacttttggagtatgcatcgatagta
gcatggaagccaaatgagttttcggaaaacaatcctcaacaactgcttcgtgagcattac
aaagcgttttgtgatgataacaattaccgtatcaaatggaatgatgagattgaagacgat
acgtcaataaaaagcctaccacttcgatttcaaagaaagaagttgacggagagggaaaat
gctttgcaaaatatgtacccattcagaaaggaagtttttacattgcaaaagcaaatggag
gaaaatcgatatatatcaaagaaaccagaagtaaaccagaagttgaatctagatccccag
caacagtggcaacaagggcaacaagagcaacaagagcaacaacaagagcaacaacaagag
cagcttccagggaaactgaaatccacaacaaccaataataagacaaacacttccaaaaaa
gttgtcaagaaagtcgaaccgccaccgaaatccaatgataaattgaaaagcaaacctaaa
agcaagcacaaaccaaccttgcgagcgagagaaatcgagtcgtcagaaattaaagaaata
gaaaagaatgagaaaataacagagatttatgtagcaaccaaagaatctacagatgacaaa
ctagttgaacatagcgatgatgaggaagggctagaagtgcatgaagagcaaatagaggaa
gaagaagaagaagaaggggaagaagaagaagaagaaggggaagaagaagaagaagaagaa
gaagaaaaatcggaccagtcacctaatccacacggagtttttcacaataattccaaaaaa
gttagtgtatcccttactgttccttctttgttgataacacacccttcacacattcctggg
tggcagccacaaccgcaagatcaaatgcaaacggatattgcggctaccgagagagattta
cagcacttggactatcaaccgcagacaattcgagtgacaaatcttaacaatgcacagcgt
gaggtaacatcgagtctttctcagcgattaagcacatttttggaaaacaggtacaagact
cccatcattgatgaagccaatgcaatagattttgcatatacaaaagaagagtacgatgaa
attaataaacaacaacagaaaatgtttaaagacatctacaataaaatatatgcagaaaat
acattggtttttacaaatcaaaaaattgaacgtcggaaaattgttcttcctccatcatca
tcaaattttaagttaaatgacccatttagaaatgctaatgctgtctcaccaaaattacct
ggaacatccaataatatgacttttcaagaccacttggttgcacagggtgcctccttttca
cgaatccatcaccagatgaggaagcaacatattaatagagccaggaaagttgctcttatc
gttgatcaacatttcaaaaggaaaagaggagagaaggaaaggcttcagcgtgaaagagag
ttaagcttaaagaaattgagcagaaccgtgatgcaagctgtgaaaagaagatggaatgag
gcagctaaagtttacagtataattcagtcggaaaaagatgaagaattaaaaaagattaaa
ggaagggaacacttgagtcaaatgttggaacactcaactcaacttcttgaagcgcaatta
atttcgtcgcgagagcaaactgctgatgctgaaagcaatttcgataattccgagatgctg
cctctgagtgatgatttcgatgcttccaaagactctgatgattatttatcaagttcagat
tctgatgatgacaatgagaataatgattatgaaggggctaaacctctttcaaagatgtcg
tccaatcaaaatttgacggaaatttctagtactgatgacaatgacttcaatttgtctgtt
gacgagcttcgaaaaaaatatgctgggattgaagggtcaatggaggctgcagaattgagt
gagatcaaaacaaacgatatcaaaatgaagaatttggaggatgatgacaaaaatggaatc
aatacaaaaaatgctagtcaagagcttataacaaattccgaatctgaaacgacagcttta
tcgatcaaaaatggaaagatgagtggcaagactttaatgaatgaaagtgaggacaacttg
ggaagcgaagtagacaatgatagctctgatgcagatgcaaagcctgttagtagtttaatc
agtttactcggcggtggcatggaagattctgatgatgacgatgacgatgaggatgctgaa
ttagattctgtctattcttcaagtgacgaagaaatgagtacctcaggagatgatgatgat
gatgagaaggaggaagaagaagaaaaagaaacagaagaagaagaaacagaagaaaaacaa
aaagaaaaagaagaagaagtagaaagtgagaaagacacggaggttggagttgaaaaggaa
gtaaatggagaaagtaaagccaacaatagagagaccccaataagcaacggccatgtcgat
gatactcacaaagaatcagaggaggatacaggtgctgtggaaataatcaatggcgcgaaa
gtcaaggatgtgccagtgccacaattgcttcgaggcacactaagaccatatcaaaaacag
ggacttaattggttggcaagtctttacaataacaacacgaatggtattttagcagacgag
atgggtcttggaaagaccatccaaacgatatctttattagcttatttagcatgcgagcat
catgtttggggaccgcatttgattgttgtgcccacatctgtcatgttgaattgggatatg
gaatttaaaaaatttgctccaggtttcaaggtattgacttattatggttcgcctcaacag
cgagcacaaaagagaaaaggatggttcaaaccggatgctttccatgtttgtataacttct
tatcaattagtggtacaagaccaacaggcattcaagagaaagaaatggagatacatgatt
cttgatgaggctcataatatcaagaattttcgatccacaaggtggagagctttactaaat
ttcaacactgagaatagattgctacttacaggtacgcctttgcaaaacaatttgatggaa
ctttggtcattattgtatttcttaatgccgtcttcaaaagccaatatggccatgcctgaa
ggatttgccaacttggaagatttccaacaatggttcggaaagcccgtagataagatcctc
gagcaaaccacgcttacaaataatgcagatttgattgacgagaatgaaaagaccaccagt
aagatggacgaggaaacgcgaaatactgtgtcgagattgcatcaagtgctcagaccgtat
atattacgtcgtttaaaaaaggatgtcgaaaagcaaatgcctggtaaatatgagcatatt
gtttattgtcgattatcgaagcgccaaaggtatttgtatgatgactttatgtcccgggca
aagacaaaagagaccttgatgtctggtaactttttgtctattataaactgtttaatgcag
ttgagaaaagtgtgtaatcatcctgatcttttcgaggttcgtcctattgtgacatccttt
gctatgcctgaagcagtttcgtcaacatatcttgctataaatagcgcagtgcaaaattgg
accaatggcaatgcaatggattgtgttgatttaaaagttttgaatttagatatcactaga
catgaaaacttggactattttgttgctgactcggctagtaaattagtttcgattaccgat
tttgaaaaacaaattgctcaattgaaatctgtgtcgagcgaggttaatacctttgaaaat
ccccattatgttaaatcatatcagcaactcaaagctcttgaccaaatagaggcgcgagac
aagatccagcacgtgtcttatataaataaattacgatgcaacagaaaacctatttatggc
aagtctttgttaaacaaattaaagattgtgaaaccagttgactcaaatgatacgtctatt
caacttggcataactgtatcgcaaagagcagagctaatgactgacgcgattgagaaattt
tcaattttgactcctgcagttgtcaccttagatttaaacaaccagatgttttccaaatct
ctacaagatcgagtacattctgaagttcttgatggcaagatattgaatccatttcatcag
tctcaagtcaaattatcgattgcttttcctgacaagaccttgttgcagtatgattgtggt
aagcttcagaaattggcgactttgatgagggatcttgttgccaatggacatagggcgttg
atttttacacaaatgaccaaagtcttggatattttggaacagtttttaaatatccatggg
tataggtatatgagattagacggtgcaacaaaaattgaggatagacagttactaacagag
aagtttaatcgcgacccaaaaatacccgttttcattctttctacaagatccggtggtttg
ggtataaacttaacgggagcagataccgttatattttacgattcggattggaatccggct
atggacaaacagtgtcaggaccgttgccatcgtattggacaggttcgtgatgtacacatc
taccgttttgtttctgaatacactatagaatccaatattatcaagaaagcaaaccaaaaa
agacaattggataatgtagtgattcaagaaggtgagtttaccacggattatttcggcaag
ttttctgttcgcgatttagtgagcgactcaaacgttacagatatcgcagaacggacaatt
gatttttccggtgatagcaagatgggttcggttctagcgcaagcagaagatgaagaagat
agagctgcagcaggcgctgctatgaaagaagttgcagttgatgacgaggactttactgaa
gacgcaaacggtcgacgcgaaaactccgacttggcactcaatactgcaactgccaacgat
gaaggtgatgctgacatggatttggactatgatgaaggtattggccacattgacgaatac
atgctacgttttattagtgaaggatatttatag
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integrated database retrieval system