Lodderomyces elongisporus: PVL30_003369
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Entry
PVL30_003369 CDS
T01116
Symbol
MSU1
Name
(RefSeq) 3'-5' RNA exonuclease complex component
KO
K19782
exoribonuclease II, mitochondrial [EC:
3.1.13.1
]
Organism
lel
Lodderomyces elongisporus
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
lel03029
]
PVL30_003369 (MSU1)
Enzymes [BR:
lel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PVL30_003369 (MSU1)
Mitochondrial biogenesis [BR:
lel03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PVL30_003369 (MSU1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Put_Phosphatase
Motif
Other DBs
NCBI-GeneID:
5233169
NCBI-ProteinID:
XP_001525974
UniProt:
A5DYU5
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Position
4:complement(585956..589423)
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AA seq
1155 aa
AA seq
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MKRIKWNNNLVRELNRAFSGQKISTRCRSSKSSLHNRRRGTRDSFAEKDYNPLAKYQESA
DLGRLYDYDSRVFVNKKMKAGGSGDLRNVVKLDKSFLDELKDKATLKQKNSNDEKFNSQN
LKNLIKSKKKIVDYDAPHLDLSKSNKQLFDEIRKNARQSRDLKYNNPSKKWSNSFSNQEL
KQMKKLFNSIPVDATVSGKSITDALQVGDLVAIGQELLKLYIVAKVPESFASAIVTLLSD
RGDVLFVHTSTICLRIPGAVPTSLRPMLKQFVELETKHLDSMPIGVPDAKFSKSKEALPT
DLQAEYVSIEASAELDEEAEYEPQNLLVTQASSQLLTNTAVQTFLVPEPAREMYYKALTQ
VSSDAFSMIEEFNTKLEKLHRSLQFDMTSELNAPRSISIFELLSRVEDVEKQNQNPSATT
SLALSPAKMVDYDKISFPIAKYMAIVFVLKKQSRLWTIQKSSQTPTRVTIWPLAQIVHED
LILQYLNNKGGIAEIAKYCVEKIAQVDSMHQTSLSSLPPPPPQFENIKNILKAYVIGKYE
NNPGVSSTVISLLRAIDDGLYKKTGVSQIEDAYKFEYSSGKAYDLLTKLDNDIISNPNNW
FPEAKLPSEELKLKSSSQEEYLRYFDDAYNSINRDILMDKCLSENLFANDPLAKIRVDMT
EVPVYCIDDASAHEIDDGISIHEEKGEYVISTHIAEPSSFIKPDSPLSSIALERASTTYF
PENVVPMFPKAIADLAGLGVNGKETRTFVIQYRLKKEDIDFFIEQSEQDSMYIPEPTFLE
RVKQQAESSAKVKFALTKRYPQGFTYDAVENLLNSGGIFGASNLGNGRNSGVSLSATRTD
FQNLNKLSKISKLFWLHRKLKNAYVGTGNARISIKQTMAEDKDLLIDGSNLIRIKLPNST
NSISFVKDKKKTSVQLVTENMIMANYLVANIADKLGIDILYKFSDPKYEKNLLNEYNDLL
RKASQNGDIPMQKKLDLFLLFPKTFISATPQMHFPMALSMYSNITSPLRRYIDIINQWKF
QEYLLKTEMVSKTSVDAVISHLNSRGEIQKRLQKSTEGFWQALMLKVFIQQYSSQENMAK
DLNLTLCLRHNPASSQMVSLVHDLFTFVRMHLEVSNALLQDIKSGKVQVGDPLDPTRLVC
KKLDIIENELIFEYK
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggattaagtggaataataatcttgtcagagaacttaacagggcattcctgggt
cagaaaattagtacgagatgtaggtcatcaaaaagtctgttacataacagaagacgaggg
actcgagactcctttgcagaaaaagattataatccattggccaaatatcaggaatcagcg
gatttgggccggctatatgattacgactcgagagtattcgtgaacaagaaaatgaaagca
ggaggttcgggagatttgcgaaatgttgttaaattggacaaatcatttcttgatgaactt
aaagacaaagcgacattaaaacaaaagaatagcaatgacgaaaagtttaactcacagaat
cttaagaatttgatcaaatcaaaaaaaaagattgtcgattatgatgcaccgcatttggat
ttaagcaagtctaataaacaactatttgatgaaataaggaagaatgctagacaatctcgg
gatttaaaatataacaacccttcgaaaaaatggagtaattcttttagcaatcaggagctt
aaacaaatgaaaaagctattcaattctattccggtggatgctacagtgagtggaaaactg
attactgatgcattacaggttggagacttggtagctattggacaggagcttttgaagctt
tatattgttgccaaagttcccgaaagctttgcctcagcaattgtcacacttttgtctgat
cgtggagacgtgcttttcgtgcacacaagcacaatctgtcttaggattccgggagctgtg
ccaacatcactacggccaatgctaaaacagtttgttgagctcgagacaaagcaccttgat
agtatgcccattggagtgccagatgcaaaattctcaaaatccaaagaagctttgccgacc
gatttgcaagctgaatatgtatcaatagaggctagcgccgaattggacgaggaagctgag
tatgagcctcagaatcttcttgttacgcaagcttcctcacaattgcttacaaatacagca
gttcaaacctttttagtgcctgagccggcaagagaaatgtactataaagctttgactcaa
gtttccagcgatgcattcagcatgattgaagagttcaatacaaaattggagaaattacac
cgaagtttgcagtttgatatgacctctgagttgaatgcgccaagatcaatatcgattttt
gagttgttaagccgagttgaagatgtagaaaaacaaaaccaaaatcctagtgcaaccacg
agtctagctttgagtcctgcaaaaatggtggattatgacaagatctcattccccattgca
aagtatatggctattgtctttgttttgaaaaagcaaagtaggctatggactattcaaaaa
tcctcgcaaactcctaccagagtgactatatggccactagcacaaatagttcatgaggat
ttgattttgcaatatctcaacaataaaggcggtattgctgaaattgccaaatactgcgta
gaaaaaattgcacaggtagactccatgcaccaaacgtcgttatcatcattgccaccaccg
ccaccacaatttgaaaacataaagaacatactcaaagcgtatgttattggcaaatacgaa
aataaccccggagtatcttccactgtcatttcgctcttaagagcaattgatgatggtctt
tataaaaaaacaggtgtaagtcagattgaagatgcttacaagtttgaatactcatctggt
aaggcgtatgacttgcttaccaagctagacaatgacataatttcaaatcccaataattgg
tttcccgaagcaaagttaccaagcgaggaattgaagcttaaaagcagtagtcaggaagaa
tatttgcgatattttgatgatgcctacaacagcattaaccgggacattttgatggataaa
tgcctatctgagaacttatttgcgaatgaccctttggccaaaattagagtagacatgact
gaagttccagtatactgtattgatgatgcctctgcgcatgaaattgacgatggaatttcg
atacatgaagaaaaaggtgaatatgtaatctccactcatattgctgagccgagctctttt
ataaagccagattctccattaagctctattgcattggaaagagcgagtacaacatatttt
ccagagaacgttgtgcctatgttccccaaagcgattgccgatcttgcagggcttggtgta
aacggcaaagaaacgagaacatttgttattcaatacagattaaagaaagaggatattgac
tttttcattgagcaaagcgaacaggattcaatgtatataccagagcctacatttcttgaa
agggtcaagcagcaggctgaactgagtgcaaaggttaaatttgccttaactaaacgatac
ccacagggattcacatacgatgcagttgaaaatttactcaatagtggaggaatatttggt
gcatcaaatcttggtaacgggcgtaatagtggagtatctttatcagctactcgaacagat
tttcaaaatcttaacaagttgtcgaaaatttccaaattgttttggcttcacagaaaattg
aaaaatgcttatgtaggaactggaaatgcacgtatttccattaaacagaccatggctgaa
gataaggaccttttaattgatggatctaaccttatcaggattaaattgccaaattcgaca
aactccataagctttgttaaagacaagaagaaaacatcagtccagcttgttaccgaaaat
atgattatggctaactatcttgttgcgaacattgccgacaaattgggcattgatatcttg
tacaaatttctggaccccaaatacgaaaagaatttactcaatgaatataatgacctttta
agaaaagcgagtcaaaatggggacatacctatgcaaaaaaagttggatttatttttattg
ttccctaaaacttttatactggccaccccccaaatgcactttccaatggcgttgagtatg
tatagtaacattacttctccgctccgtcgatacattgatatcattaatcagtggaaattt
caagagtatcttctcaagaccgaaatggtttcaaagacctctgttgacgctgtcatttca
catctaaacagtcgtggtgaaatacaaaagaggttgcaaaaatctactgagggtttttgg
caagcattgatgttgaaagtgtttattcagcaatacagtagtcaagaaaatatggcaaag
gatttgaacttgactctatgtttaagacataatcctgccagcagccagatggtatcacta
gtacatgacctctttacctttgtccgcatgcatttagaagtatcgaatgctttattgcaa
gacataaagagcggcaaagtgcaagtgggcgatccactcgatccaacaaggttagtatgc
aaaaagctagatattattgaaaacgagttgatctttgaatataaatag
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