Lodderomyces elongisporus: PVL30_003388
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Entry
PVL30_003388 CDS
T01116
Symbol
VPS28
Name
(RefSeq) Vacuolar protein-sorting-associated protein 28
KO
K12184
ESCRT-I complex subunit VPS28
Organism
lel
Lodderomyces elongisporus
Pathway
lel04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
PVL30_003388 (VPS28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lel04131
]
PVL30_003388 (VPS28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lel04147
]
PVL30_003388 (VPS28)
Membrane trafficking [BR:
lel04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
PVL30_003388 (VPS28)
Exosome [BR:
lel04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PVL30_003388 (VPS28)
Exosomal proteins of other body fluids (saliva and urine)
PVL30_003388 (VPS28)
Exosomal proteins of colorectal cancer cells
PVL30_003388 (VPS28)
Exosomal proteins of bladder cancer cells
PVL30_003388 (VPS28)
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Ortholog
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GFIT
Motif
Pfam:
VPS28
CovS-like_HAMP
Sod_Fe_C
Motif
Other DBs
NCBI-GeneID:
5233389
NCBI-ProteinID:
XP_001525995
UniProt:
A5DYW6
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All DBs
Position
4:complement(join(654483..655307,655564..655569))
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AA seq
276 aa
AA seq
DB search
MFKYNYSARGGTMSTYQDYAPTSSTSFTVSSDSVKYSQEISKSTLIETSTHQSVYNALAE
VCSILPTLDMLEVSFIKDFITEKEKYTTTTYRLINQYQMILKGFDNDAIQVLQKLLPDLE
NDLSNFLPLFVDKFNLNCPQAVKRLISGVPSVIDQVSHNSAGEQNVNQNGNQNGQNSQSV
SGNARLIAEITGNFITCMDALKLNYSTRAQLHPLLSDLVVNLNELSENIQFEGKSKLINW
LIKINNLEKELNQEDSDAFLKDLDVAYKGFYSSLDR
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagtacaactattctgcaagaggaggcaccatgtccacttatcaagattatgca
cccacttcgctgacttcgttcactgtttcatcagactcggtcaagtatagtcaagaaatt
agtaagtcaactttgattgagacttcgactcaccaatcagtttataatgcattggctgaa
gtttgttcaatattacctacgctcgacatgctcgaggttagttttatcaaagatttcatt
actgaaaaagagaaatacacaacaactacgtaccgactaatcaatcaataccaaatgata
cttaaggggttcgataatgatgcaatccaagtgttgcaaaagcttttaccggacctcgag
aatgatttgtcaaattttcttcccttatttgttgacaagttcaatttgaattgcccgcaa
gctgtgaaaagactaattagtggggtaccatcggttattgaccaagtatcacataattca
gccggagaacaaaacgtaaaccaaaacggaaaccagaatggtcaaaatagccagagtgtg
agcggaaatgccagactaattgcagagatcactggtaatttcattacatgtatggatgcc
ctaaaactaaattacagcacacgagcacaacttcatcctttactcagtgatttagttgtt
aatttaaacgagttgagtgaaaacatacaatttgaaggaaaatcaaagttaattaattgg
ctaatcaaaattaacaacttggaaaaggagttaaatcaagaggactcggatgcattccta
aaagatttggacgttgcatacaaaggtttttattcatcattggacagataa
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