Lodderomyces elongisporus: PVL30_003412
Help
Entry
PVL30_003412 CDS
T01116
Symbol
PMS1_2
Name
(RefSeq) ATP-binding mismatch repair protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
lel
Lodderomyces elongisporus
Pathway
lel03430
Mismatch repair
lel03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PVL30_003412 (PMS1_2)
03460 Fanconi anemia pathway
PVL30_003412 (PMS1_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lel03400
]
PVL30_003412 (PMS1_2)
DNA repair and recombination proteins [BR:
lel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
PVL30_003412 (PMS1_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Pox_RNA_Pol_19
Motif
Other DBs
NCBI-GeneID:
5233060
NCBI-ProteinID:
XP_001526024
UniProt:
A5DYZ5
LinkDB
All DBs
Position
4:complement(722761..725607)
Genome browser
AA seq
948 aa
AA seq
DB search
MSIQGINATDISKITSGQVIIDLRSIVKELVENAIDASAKKISVNFANYGIDSITVQDNG
KGISENDFDTVCLRSHTSKIKEFEDLSKLGTLGFRGEALNSICALANKVSIKTRTLDSNP
ICHILDFDQFGALVKNTKKRGDMSTPSGTVVTIESIFKKFPVRWKNFIKNSKKEFHKTVS
FITNYLLIYPTIKFEVTNVNNGKRSLILSSRGGENNTSTENLISIFGTNGNTNLLEINLQ
INKDISIAGHISSYSFGLGRSTQDRQFLFVNKRPIVYKKLAKIINEIYKSFNHVQFPVYI
LNLDINPEAIDVNLLPDKTSVLVHNEDKVLELIRESLITFYETKDEVVIPRNTQSQYTIP
SRTHSMDEASTKSDQSKRQSNINETLKAFSNDTDSSFTEIVAKDHKIMKSDSKHRDDEET
EEEKEEKEGQQQQGDDDDDHHHHHDGGGGGTYKVIDEVINEIKAHETGFGTFHESVKSSF
SSEADVELKKCSSPALSHEYASLRNPLYIEGGVPTLVSYPSIHGSNDEINNKNDNNNDDN
DDNDDKNNNDDNDNDNDNAVKKSTEDKEINSKASVNLKRHFDYTTTAATALQSDLDSEKD
SNNATCISSPFIKTDNMDSASRKRFKGIMSSYLYEKPVMQQSNSLEAEEINPADNHGKNY
FPVSEEQTSENGLHIQIGDEQFVEESLAKHKQTNRKSDLFKRWEIVSSESVMSLLEERMT
IFGDDANYKAQKLLINKSLDEQEIYQIKKTDFLDMKLIGQFNLGFILVCHGSNLFIIDQH
ASDEKFNFERLLETFAVNYQPLITPLFVDLNVIDEMLVLDHEQIFQNNGFKISVDYDKPA
GAKISLTSLPVYKNIMFSVDDFYELINLINEQPSNRNIKCSKIRKIVAMKACRSSIMIGS
FLSKQRMQKVVANLSKLDKPWNCPHGRPTMRHLIESNNWQSRYPDYFL
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtccattcaaggaatcaatgctacggatatctccaagatcacttcgggacaagtgatt
attgacttgagatctatagtgaaagaacttgttgaaaacgcaattgacgcatcagcgaaa
aagatcctggtgaattttgcaaactacggtatagactcgataactgttcaagataatggt
aaaggtataagcgaaaatgattttgacactgtctgcttgcgaagtcatacctctaagatt
aaagagtttgaagatttatccaagcttggaacattggggtttcgtggagaagctttgaat
tccatatgcgctttagcgaacaaggtttccataaagacgcgtactcttgattcgaacccc
atttgtcatattctagattttgatcagtttggagcacttgtcaaaaatacaaagaagcga
ggggatatgagtactccctcggggactgttgttacaattgaaagcatattcaaaaaattc
cctgttcgatggaaaaactttatcaagaattccaaaaaggagtttcacaaaactgtcagc
tttattaccaactacctattgatttaccccacgatcaaatttgaagtgacaaacgttaat
aatgggaaaagaagtcttatattatcttcgaggggaggcgagaacaacacaagcacggaa
aatttgatttccatctttggtacaaatggtaataccaacttgctcgaaattaacttgcag
ataaacaaagacatttcaattgcgggccacatatcatcctactcttttggccttggacgt
tctacacaagatcggcagtttctctttgttaataagcggcctattgtttacaagaaattg
gccaaaattataaatgaaatttataaatcgttcaatcatgtccaatttcctgtgtatatt
ctcaacttggacatcaaccctgaagccattgatgtgaatttgcttcccgacaagactagt
gttcttgttcataatgaagataaggtgttggaactcattagagaaagtttaataactttt
tatgaaacaaaagacgaagttgtaataccgcggaatacacagagtcaatatacaatacca
agtcgtacacacagcatggatgaagcttctacaaaactggaccaatctaagcgtcaatcc
aatatcaatgaaacgttgaaagcttttagcaatgataccgacagtagctttacggaaatt
gtagccaaggaccataaaataatgaagctggactcaaaacatagagatgatgaagaaact
gaagaagaaaaagaagagaaggaaggacaacaacaacaaggtgatgatgatgatgatcat
catcatcatcatgatggtggtggtggtggtacttataaggttatagacgaggttataaat
gagattaaagctcacgaaactggttttggtacttttcacgaatcagtaaaatccctgttt
agtctggaagcagatgttgagcttaagaaatgttcctcccctgcattgagtcatgaatat
gcatcattaagaaaccccctatacattgaaggtggagtgccgactttggtatcgtatcct
tctattcacggaagtaatgacgagatcaacaacaaaaatgacaataacaatgacgataat
gatgacaatgacgacaaaaacaacaacgacgacaatgacaatgacaatgacaatgctgta
aagaaaagtactgaggataaagaaatcaatagtaaagcaagtgttaatttgaaacgccat
tttgattatactactacagccgcaacagcattgcagtctgatttagattcggaaaaggat
tccaataatgccacttgcatttcctccccctttattaaaacggacaatatggattctgct
tcacgaaagcggtttaaaggtataatgtcatcatatttgtacgaaaaaccagtaatgcaa
caaagtaattctttagaagcagaggagatcaaccctgctgataatcacgggaaaaactat
ttccctgtttctgaagaacaaactagcgaaaatggtttacatattcagattggtgatgaa
cagtttgtggaggaaagcttggcaaaacacaaacaaacaaatcgcaaaagtgacttgttc
aaaagatgggaaatagtttcttctgagagcgtgatgtcattgcttgaagaaagaatgaca
atatttggagatgatgcgaactataaagctcagaaacttttgataaacaaaagcttagat
gaacaagagatttaccaaatcaaaaagacagattttttggatatgaaactcattggccaa
ttcaacttggggtttattttggtgtgtcatgggtcaaatttgtttattattgaccaacat
gcctcggatgagaaattcaactttgagcgtcttttagagacatttgcagttaattaccag
ccattgatcacaccattatttgttgacctaaatgttatcgatgagatgcttgtgcttgat
catgaacagatatttcaaaacaatggtttcaagatatcggttgattatgacaaacctgca
ggtgcaaaaatctctttaacgtctttaccggtgtacaaaaacattatgttcagtgtggat
gatttttatgaactaatcaacttgataaacgagcaaccaagtaacaggaacataaaatgc
tccaagattaggaaaatagtggccatgaaagcgtgtcgaagcagtataatgattggctct
tttttatcaaaacaaagaatgcaaaaagtagtggcaaacttgagcaagctagataagcca
tggaactgtccgcatggcagacccacaatgcggcacttgatcgagtcaaacaattggcaa
agccggtacccagactattttttataa
DBGET
integrated database retrieval system
