Lodderomyces elongisporus: PVL30_003548
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Entry
PVL30_003548 CDS
T01116
Name
(RefSeq) uncharacterized protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lel
Lodderomyces elongisporus
Pathway
lel03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PVL30_003548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lel03019
]
PVL30_003548
03036 Chromosome and associated proteins [BR:
lel03036
]
PVL30_003548
Messenger RNA biogenesis [BR:
lel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PVL30_003548
Chromosome and associated proteins [BR:
lel03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PVL30_003548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nucleoporin_FG
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
5233504
NCBI-ProteinID:
XP_001526141
UniProt:
A5DZB2
LinkDB
All DBs
Position
4:complement(1053218..1056607)
Genome browser
AA seq
1129 aa
AA seq
DB search
MFGSSSSGFGGFGNNTANPANSPFGGGGTTQAGASPFGSSTTGGGGLFGNNNNTTTAQQQ
QQQQQQQQPSTFGSGGAFGSNTGGIGGVGSNGGLFGTQTNTALSPFGQQQQQPQQSTQPS
SVFGNANSTAGTSAFGTSSGGGLFGSKPATSSTFGGFGTGNTTSSPFGGTATTATTNAFG
TSAAIDPNVNNGTAGRAFTPFTEKDSANINNVFQNICCMSEYKNFSFEELRLKDYEQGRR
FANQAGAGAGTGAGVGGAGATGTGFGFGSSQQPLGGGLFGSQNNNTSSPFGGNASGSAFG
SSFNKPTGSPFGSNGQSTGAFGSAQNPSPFGATNATGGGAFGNSGGATNAFGSGGGAFGA
KPATGFGGLGSTNTTGNAFGSNTGGGGAFGQGGTGFGGSTNSPFGASNSNTGNAFGASSN
SPFGQNNNSNALGGGAFGATNTGSVFGGSNNTGSGSGGGGGGLFGQSNTNAFGSGSAGGG
GGGGGLFGQSNNNNSNNVFGANKPATGFGSGTSGGLFGQSNQSQSNQGGGLFGQNNSNQQ
SGGGLFGSKPAATGTTSAFGQNNTGGLFGGGNQQNNTSGGLFGSKPAGTTGGGLFGNNTQ
QGTSGGLFGQQQQQPQSSGGGLFGSKPAGSTGGGLFGGQSNTLGSSGVLFGGGNQNQQQQ
NSNAFGNGSSAGGLFGSKPGVGGATGGLFGSGGQQQSTASGATGGGLFGGGSSSTSGGLF
GSKPAQNGIGTGTGTGGLFGGGNNTNNNNNNNNNNSNNSNTVGGGFGNFAGGLSTSGGFS
QQSQPQSSQPSFLQQSQQQQTQPLANINTQNPYGNNPLFQSITGTSQEQGQGQRPQAVIV
SSSLSSSNPAKKTVTLGSASSRITPLFKVNVLSAKKPEEKAQDQLFKKKVDNLFSPITDS
AIITSDVFKPNINFKKLVIEKSSGEDGKNGQLLVSGTSSPTKQVTFGFESKKKPASSETL
ESQTKGDSGDKVGSGERENGEEVFDADGYWMSPSLNELKKKSLLELKSVHDFKIGRKNYG
TLKFIDPVDLTAMINLEDIPGNLVTFDTKSCVVYPDDDVKPRPGEGLNLPAEITLEGCFP
LNSVDKLPILDPKSDVVKRHIENLKKLPEMEFISYDPETGDWKFRVKEM
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaagctcatcttctggttttggtggctttggaaacaataccgccaacccagca
aactctccatttggtggaggaggtactactcaagctggcgcttcgccattcggtagcagc
actactggtggtggaggtttatttggaaataacaacaatacaacaacagcacaacaacaa
cagcaacaacaacaacagcagcaaccatctacatttggatccggcggcgcatttggtagt
aacaccggaggcattggtggtgttggtagtaatggtggactctttggcacacaaacaaac
actgctttatctccttttggccaacaacagcaacaaccacagcaactgacccagccttcc
tctgtgtttggaaatgccaattcgacagcaggcacatctgcatttggcacatcgtctgga
ggtgggcttttcggaagtaaacccgctacatcatctacgtttggtggttttggcacagga
aatacaacttcatcgccctttggtggaacagcgacaaccgcaacaaccaatgcatttgga
acctcagcagcaattgatccaaacgttaataatggaacagccggtagggcttttactcca
tttactgaaaaggactcagccaatattaataacgtttttcaaaatatttgctgtatgtct
gaatataaaaacttttcgtttgaagagttgagattgaaggattatgagcaagggcgaagg
ttcgccaaccaagctggtgctggtgctgggactggtgctggggttggaggagctggtgct
actggaacaggttttggttttggatcatctcaacaacctttgggtggtggtctctttggg
tcgcagaacaacaatacatcgtcgccatttggtggcaatgctagtggttctgcttttggc
tcatcttttaacaaaccaaccggttctccatttggtctgaacggtcaatctacaggagca
tttggttctgctcaaaacccatcaccttttggtgcaacaaacgctacaggtggtggtgca
tttggtaatagcggaggagcaacaaatgcatttggtagtggaggcggtgcttttggtgct
aaaccagcaaccgggtttggtggacttggttctacaaacactactggaaatgcatttggc
tccaacactggtggtggtggtgcttttggacagggaggcactgggtttggtggtagcacc
aattcgccttttggagcatctaattcaaacactggtaatgcgtttggtgcaagttcaaat
tcgccatttggacaaaacaacaacagcaatgctctaggcgggggtgcatttggtgccacc
aatacaggttctgtatttggcggctcgaataacacagggtctggaagtggtggtggtggt
ggtggattgtttgggcaatcaaatacaaatgctttcggatcaggcagcgctggcggtggc
ggtggcggtggcggtttgtttggacaactgaacaacaacaatagtaacaacgtttttgga
gcaaacaagccggcaaccggatttggttctggaacatccggtggtttgtttggtcaactg
aaccaactgcagtcaaatcaaggtggtggcttgtttggtcaaaacaatagcaatcaacag
agtggcgggggtctctttggttctaagcctgctgctactggaacaacatcagcttttggg
caaaacaatactggtggcttgtttggcggtggtaatcaacaaaataacacatctggtggt
ctctttggttcaaagccagctggaacaactggtggtggattatttggaaacaatactcaa
cagggcacttctggtggactatttggacagcaacagcagcagccacaatctagtggcgga
ggactctttggctcaaagccagctggatctacaggtggcggactttttggcggccaactg
aacacattgggtagctcgggtgtattatttggtggaggcaaccaaaaccagcaacagcaa
aatagcaatgcttttggtaatggctcttctgcaggtgggttatttggatctaaacctggc
gttggtggtgcaactggtggtttatttggaagcggtggccagcaacaaagcactgcatct
ggtgccacgggcggcggattattcggtggtggtagttcttctacttctggtggattattt
ggttctaagccagcacaaaacggcattggaactggcactggaactggtggtttatttggt
ggtggaaataacaccaacaataacaataacaataataataataatagtaataatagtaat
actgtcggtggtggctttggaaattttgcaggtggtttgtctacctctggcgggtttctg
caacaactgcaaccacaatcatcgcaaccgctgttccttcaacaatcacaacaacaacaa
acccaaccgttggcaaatatcaatacgcagaatccgtatggaaacaatcctcttttccag
tcgatcactggcactctgcaagaacaaggtcaaggtcagcgaccgcaagcagtaattgtc
agttcttcattgtcttcttcaaatccggcaaaaaagactgttactttggggagcgcgtcg
ctgaggattactccattattcaaagttaatgtgttgtcggcaaagaaacccgaggagaaa
gcgcaggaccaactatttaaaaagaaagtggacaatttgttttcgcccattactgatctg
gctataatcacctctgatgtgtttaagcctaacatcaatttcaagaaattggttatagag
aagtccagtggagaagatggaaagaacggacagttgttggttagtggaaccagtagtccc
accaaacaagtgacttttggttttgaaagcaaaaagaagcctgcttcgtcagagacttta
gaaagccaaactaaaggggactcgggagataaagtaggttctggagagagagaaaatggt
gaggaagttttcgatgcagatgggtactggatgtcgccttcattgaatgagttgaagaag
aaatcgcttttggagttgaaatctgtgcacgatttcaaaatcggcagaaagaattatggt
acattgaaatttattgatcccgttgacttgactgccatgatcaatctcgaggatatacca
ggtaacttggtgacatttgataccaagtcgtgcgtcgtatacccagatgatgatgtaaag
ccaagaccaggtgaaggattaaacttgccagccgaaattacccttgaaggttgttttcct
ctcaatagtgtcgacaagttgccgatcttggaccccaagagcgacgttgttaaacgccat
attgaaaatttgaaaaaattaccggagatggagtttatctcgtatgatccagagactggt
gactggaagtttagagtgaaagagatgtaa
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