Lodderomyces elongisporus: PVL30_003642
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Entry
PVL30_003642 CDS
T01116
Symbol
nob1
Name
(RefSeq) 20S-pre-rRNA D-site endonuclease nob1
KO
K11883
RNA-binding protein NOB1
Organism
lel
Lodderomyces elongisporus
Pathway
lel03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PVL30_003642 (nob1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lel03009
]
PVL30_003642 (nob1)
03051 Proteasome [BR:
lel03051
]
PVL30_003642 (nob1)
Ribosome biogenesis [BR:
lel03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
PVL30_003642 (nob1)
Proteasome [BR:
lel03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
PVL30_003642 (nob1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
Zn_ribbon_8
DUF7130
HVO_2753_ZBP
Zn_ribbon_19
Motif
Other DBs
NCBI-GeneID:
5232902
NCBI-ProteinID:
XP_001526240
UniProt:
A5DZL1
LinkDB
All DBs
Position
4:complement(1336980..1338437)
Genome browser
AA seq
485 aa
AA seq
DB search
MHSTKHVETVILDAGPLITQPASSLQQFANSFYTTPGVHSELKDDYVRQQLVLWGDSLKI
KQPKQEYIDKVIKFAKLTGDYSVLSVNDLHIIALAYELEIESGGKLRSFPGEILESPKPD
FAVQNNAANLTDSDGFAVVKKKGRKRGGKRQREKREAEMKRLQEEKETAQNGTDDGDERN
VSAQIASKHPENLVDKDQDVPTVHDASKDLAKKSTQESTQKPVQEPVQDNTRKVEENPPF
VEEEYNDSDDDGEWITPENVQEEMLKDQNEQIQDSGSNSHLVKVALATGDFACQNVAMQL
GINLLNTMSGKQIKRVRNYMYRCHACFRLTPINKDGRPKHFCPKCGGDTLIRCAVSVDNK
TGKITPHLKANFQWIKRGEKYSLPSPLSKNQQRLQGKGGYQHNKQNRHKTQQAPLILRED
QKEYAQALKNDDWERRQNEKLLQDWIGGGSADNYVSPFGTVNTIRPSGVRVGKGRYVNSS
RGKKK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcatagtaccaagcatgtagaaactgtgatattggatgcaggcccattaatcactcaa
ccagcctcgtccctacaacaatttgcaaatagcttttacactactccgggagttcattca
gaattgaaagacgattatgtacgccagcagttggttctttggggcgatctgttaaagatc
aaacagcctaaacaagaatacattgataaagtgataaagtttgccaaattgactggtgat
tatagcgtattgtcagtaaacgatttgcatattatagcattggcttatgaattagagatt
gaaagtggaggaaaattacgaagttttccaggagagatcttggagagtcctaaaccagat
tttgctgttcagaacaatgctgctaacttaacagattctgatgggtttgcagtggtgaaa
aaaaagggacgtaaaagaggcggtaaaagacaaagagaaaagagagaagctgaaatgaag
agacttcaagaagagaaggaaacagcacaaaacggtaccgatgatggggacgaaaggaat
gtttctgcacagattgcatcaaagcatccagaaaacttggttgataaggatcaagatgta
ccaacagtacacgatgcgtcaaaagatttagcaaaaaaatctacacaagaatctacacaa
aaacctgtacaagaacctgtacaagataacacacgaaaagttgaagaaaatccgccattt
gtagaggaagaatacaatgattccgacgatgatggagaatggatcacaccagaaaacgtc
caagaggaaatgttgaaagatcaaaatgaacagatacaggattctgggtccaatagtcat
ttggtgaaagtggcgttagctacaggggattttgcgtgtcaaaatgttgccatgcaattg
ggtataaacttgttaaataccatgtctggtaagcaaatcaagcgtgtgcgaaactacatg
tataggtgtcatgcatgtttcaggctcacaccaatcaacaaagatggtagaccaaaacat
ttctgtcccaaatgtggaggtgatacgttaatcagatgtgctgtttccgtggataacaag
acaggtaaaataacccctcatttgaaagccaatttccaatggatcaagcgtggagaaaag
tattcgcttccttcaccattgagtaaaaatcaacaaagattacaaggtaaaggcgggtac
caacacaacaagcaaaataggcacaaaacacaacaagctccgttgatcttgagagaagat
cagaaggagtatgcgcaagcattgaaaaacgatgattgggaaagaagacagaatgaaaaa
ttgttacaagattggattggtggaggaagtgccgataactacgtcagcccttttggcact
gttaatacgatcagaccatcgggtgtacgtgtgggtaaaggtcgttacgtcaattcttca
agaggtaaaaaaaagtag
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