Lodderomyces elongisporus: PVL30_003734
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Entry
PVL30_003734 CDS
T01116
Symbol
TOP3
Name
(RefSeq) DNA topoisomerase
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
lel
Lodderomyces elongisporus
Pathway
lel03440
Homologous recombination
lel03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PVL30_003734 (TOP3)
03460 Fanconi anemia pathway
PVL30_003734 (TOP3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lel03032
]
PVL30_003734 (TOP3)
03400 DNA repair and recombination proteins [BR:
lel03400
]
PVL30_003734 (TOP3)
Enzymes [BR:
lel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PVL30_003734 (TOP3)
DNA replication proteins [BR:
lel03032
]
Eukaryotic type
DNA Topoisomerases
PVL30_003734 (TOP3)
DNA repair and recombination proteins [BR:
lel03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
PVL30_003734 (TOP3)
FA (Fanconi anemia) pathway
PVL30_003734 (TOP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
FNIP_C
Motif
Other DBs
NCBI-GeneID:
5233071
NCBI-ProteinID:
XP_001526340
UniProt:
A5DZW1
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Position
4:complement(1647787..1649646)
Genome browser
AA seq
619 aa
AA seq
DB search
MKVLCVAEKPSIAKEVASILGGGRVEVRNSKNKYIKNYDFKFLFPQSGQCDVTMTSVVGH
ITNLDFPPEYSWGKCAASRLFTAEIVTKITKQDVFDNISKEARNSDQLMIWTDCDREGEF
IGKEIFDAARKGNPRLTLRNVWRARFSHLDKSHVLRAARSPSELDMKSAAAVACRMEVDF
RVGLSFTRLLTDSLKASRTIDTKDVVSYGTCQFPTLGFVVDRYKRVQSFKPEPFWFIEPT
VWKEKKKTTFNWCRGHVFDRFYVALQYESCLQHEFGTITKLETKRTTNWRPLPLTTVELQ
KDCSRYFKMSAKAALEAAESLYNRGFLSYPRTETDKYPSSMDFSGILEKQKQDSRWGQYT
SELLQRGLEAPRNGSHDDHAHPAIHPVNYVSLDTLTNANEKKVYEYVVRRFLACCSKDAV
GSMTSATLKWGDEFFTTSGLMVLERNYLDIFIYKKWESSKQLPTFQEGEQVKISNGVMKE
GKTSPPSLMTEPELIALMDVNGIGTDATIAEHIDKILSRKYVIKQKKGKTDFIIPSGLGI
GLIEGFDKMEFNGISLSKPFLRKSLESSLQEICGGSKTKVEVVEDMKSLYLDAFNTCSQR
ISILTSHCRANLNQNVSVR
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtattatgcgtggccgaaaaaccgtcaattgcaaaagaagtggcatcaatttta
ggaggcggtagggtcgaagtgagaaattcgaaaaataaatatatcaaaaactatgatttc
aaatttttattcccgcaatcgggccaatgtgatgtgacaatgacctcggtcgttggtcat
atcacaaaccttgactttccacctgagtacctgtggggtaaatgtgccgctagtcggctc
tttactgctgagattgtcacaaaaattactaagcaagacgtgtttgataacatttcaaaa
gaagcaagaaactctgaccaattaatgatttggacagattgtgatagagagggtgaattt
attggtaaggagatatttgatgcagctaggaaaggtaacccacgactaacgttgcgcaat
gtttggagagcacgattctcgcatcttgataaaagccatgtacttcgagcggcaagatct
ccttcagaattggatatgaaatcggctgcagctgttgcatgcagaatggaagtggatttt
cgagttggcttgagctttacacgattgttaacggactctttaaaggcaagtaggacaatc
gatacaaaagatgtcgtctcttatggaacatgtcaattccccacattaggtttcgtcgtt
gacaggtataaaagagtacaaagtttcaagcctgaaccgttttggtttatagagccaacg
gtttggaaagagaaaaaaaagacaacttttaattggtgtcgaggacacgtctttgatcgt
ttctatgtagctttacaatacgaatcgtgtttacaacatgaatttggtacaatcactaaa
ttggaaacaaagagaactacaaattggcgcccgctcccattgaccacggtggagttgcag
aaggattgctctcgatattttaagatgtcagcaaaggcggcacttgaagctgccgaaagt
ttatataatagaggtttcctttcatatccaagaacagagactgataagtacccatcatca
atggactttagtggtatcttggaaaaacaaaaacaggacagtagatggggtcaatacact
ctggaattacttcaacgcggtttagaagcgccaaggaatggttcacatgatgatcatgcg
catccggcaatacatccagttaattatgtttctcttgataccttgaccaatgccaatgaa
aaaaaagtttatgagtatgttgttcgtcgtttcttagcatgctgcagtaaagatgcggta
ggtagcatgacgctggcgactttaaaatggggtgatgagttcttcactacaagtggttta
atggtacttgaaaggaactatttagacatctttatctacaagaaatgggaaagctcaaag
cagttgcccaccttccaagaaggagaacaagtgaaaatatcgaatggagttatgaaagag
ggcaagactagtcctccgtcactaatgactgagccagaactcattgcgcttatggatgtt
aatggaatcggcactgatgcgacgattgcagaacacattgacaagatattgtcgcgaaaa
tatgtcataaagcagaaaaagggcaaaacagactttatcattccttcgggtcttggaatt
gggctcattgaaggctttgacaagatggaatttaatggtatttcactttcgaagccattt
ttgagaaagtcattggaaagttcattacaggagatatgcggaggactgaagacgaaagta
gaagttgtagaagacatgaagagtttgtatcttgatgcattcaacacttgtagccaaagg
atctccatcttgaccagtcattgtcgagcaaacttgaatcaaaatgtaagtgttcggtga
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