Lodderomyces elongisporus: PVL30_003771
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Entry
PVL30_003771 CDS
T01116
Name
(RefSeq) uncharacterized protein
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
lel
Lodderomyces elongisporus
Pathway
lel03040
Spliceosome
lel04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVL30_003771
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PVL30_003771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lel03041
]
PVL30_003771
04121 Ubiquitin system [BR:
lel04121
]
PVL30_003771
03400 DNA repair and recombination proteins [BR:
lel03400
]
PVL30_003771
Enzymes [BR:
lel01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
PVL30_003771
Spliceosome [BR:
lel03041
]
Complex B
Other components
Prp19 complex
PVL30_003771
Complex C
Prp19-CDC5 complex
PVL30_003771
Ubiquitin system [BR:
lel04121
]
Ubiquitin ligases (E3)
U-box type E3
PVL30_003771
DNA repair and recombination proteins [BR:
lel03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
PVL30_003771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp19
Beta-prop_THOC3
zf-Nse
Motif
Other DBs
NCBI-GeneID:
5233027
NCBI-ProteinID:
XP_001526386
UniProt:
A5E007
LinkDB
All DBs
Position
4:1752905..1754572
Genome browser
AA seq
555 aa
AA seq
DB search
MICALSGLPIQNPVASPKSGSVFEKKYIEKYVLTSGKDPINDEPLTIGELISLRITPLSQ
TSSIPGSLNGNGNDSSNPNNNSNSNINNNDNDNNDINIIPPAPATSSIPSLLSTLQNEWD
SIVLELFTLRKTVQSLKQQLSMALYRADASVNVAAKALRERDQARREIERLVLSLEVKPE
EKTEDKDNIDEEKINTGDGVLQQIQEAKEKLFIEHKSKKVKFPYTANKFRFASVSEANGV
FKVKLDASDLLEKHVRFETLNKTISLVHENEVISYSLFDNLFTKWQTSSKDDITKFCINS
HGVIAAAYGSTLEFSTGAKFGIKAAEIVAHPELNLFVVFTETEYLITNGQEVLFKKNLTF
STDLAAIHVDGQLIALDDKKQISLFDLVSGEVVGSVPYVEHTISTSSSKTRLNRSVIQIQ
FAANGYWLFILSDIFDGTIDKDHGIVSVIQVIDLRKIAEVKKFEFDFKVDNFVIDPTSTV
LFVNNEDGISSSIYSKKTKTWSAWESVEFAEGMSKGKNVLRLFSNVDDIAKNQNLELVHL
DGYNDVCRCLRLEGV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgatttgtgcactttcgggacttccaattcaaaatcccgttgcatcgcccaagagcggg
tccgtttttgaaaagaaatacatagagaaatacgttctcaccagtgggaaagatccaata
aatgatgaaccattaactataggggagcttatatcattacgtattacccccttgtcacaa
acctcatctatacctggctcattaaatgggaatggtaatgattcatcaaaccctaacaac
aacagcaacagcaacatcaataataatgataatgataacaatgacattaacattatacca
ccagctcctgccacatcatcaattccgtcacttctttcaacattacagaacgagtgggac
agtattgttcttgaattattcacactacgaaaaactgtacagctgttgaaacaacaactc
agcatggctttgtaccgtgctgatgcttcagtgaatgttgctgcaaaagctcttagagaa
cgcgatcaagctagaagagagattgaacgattggtgttgagcttagaagtcaaaccagag
gaaaaaacggaggacaaagataatatagatgaggaaaagataaatacgggcgatggtgtg
ttacaacagattcaagaagccaaagaaaagttgtttatcgagcacaagagcaaaaaggta
aagtttccatacactgcaaacaagtttcgatttgctagtgtatccgaagccaatggagta
ttcaaagtgaagcttgatgcttcagatttacttgaaaagcatgtaaggtttgagaccctt
aataagactattagcttggtgcatgaaaatgaagtcatatcatacagtctttttgataac
ttattcacaaagtggcaaacaagcctgaaagatgatattacaaagttttgtattaacagc
cacggtgtgattgctgctgcatatggttctacattggaattctctacaggtgcgaaattt
ggaattaaagcagcagaaattgttgcacatcctgaactcaacttgtttgttgtatttacc
gagaccgagtatttaatcacaaatggtcaagaagtactctttaaaaagaatctcaccttt
agcacggatttggcggcaatacatgtggatggacaattaatcgcattggatgataaaaag
caaatactgttattcgatctagtgtcgggtgaggttgttggatctgtcccgtacgtggaa
cacacaatttcaacctcaagttcaaaaactaggttaaaccgctcagtaatacagatacag
tttgcagcaaatgggtactggttgtttattttgtctgatatctttgatggaacgattgat
aaagaccatggtattgtaagcgttatacaagtgattgatttgaggaaaattgcagaagtg
aagaaatttgagtttgatttcaaggtagacaattttgttattgatccaacttcaacggtg
ctttttgtaaataatgaggatggaatctcgtcatcgatatatctgaaaaagacaaagaca
tggagtgcttgggaaagtgtagagtttgcagaaggtatgagcaagggtaagaatgtttta
aggttgttttctaatgtggatgatattgccaagaaccagaatttggagttggttcatttg
gatgggtataatgacgtgtgcagatgtctacgattagaaggagtatag
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