Lodderomyces elongisporus: PVL30_003820
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Entry
PVL30_003820 CDS
T01116
Symbol
taf6
Name
(RefSeq) histone H4-like TAF Taf6, SAGA complex subunit
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
lel
Lodderomyces elongisporus
Pathway
lel03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PVL30_003820 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lel03021
]
PVL30_003820 (taf6)
03036 Chromosome and associated proteins [BR:
lel03036
]
PVL30_003820 (taf6)
Transcription machinery [BR:
lel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
PVL30_003820 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
PVL30_003820 (taf6)
Chromosome and associated proteins [BR:
lel03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
PVL30_003820 (taf6)
STAGA complex
PVL30_003820 (taf6)
TFTC complex
PVL30_003820 (taf6)
SAGA complex
PVL30_003820 (taf6)
SLIK complex
PVL30_003820 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
TFIID-31kDa
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
5233290
NCBI-ProteinID:
XP_001526435
UniProt:
A5E056
LinkDB
All DBs
Position
4:complement(1893237..1894826)
Genome browser
AA seq
529 aa
AA seq
DB search
MDTRVPLSHSLWSPYDTVKDSADSMGINLPDESAKNLAMDVEYRIHEILELAIKFMRHSK
RKTLMTTDIDYALKVLNVEPLYGYDNSQPLTFKETMVGAGGQTLYYIDDHEVEFEKLINQ
ELPKIPRKTTFTAHWLAIEGVQPMVPQNPLPSEIKNLPPAVRGATSTFLGNDVLALGVSN
DGKDGGGSGGVGVSKKKAGTATSTSTTERDFETKPLVKHVLSKELKLYFDKVVEVLVSSD
PEKESLKNAALTSLKSDPGLHQLVPYFIQFVAEQITNQLRNIEILSTMLEVISALADNRT
IFLDPYVHALMPCILTLLLAKRIGPVVKDNSPECEDTLRSQLAIREFAAILLEHVIKTYG
SSYSTLRPRVTRTLLRALLDSTKPVGTHYGALLGLKNLGSEVLKLVLVGNLKVWYRTIIE
ENESELEKEILVNTVIDILRSLKVNLEIGGVSNGNGTDNNKNDYVNNNNNTNKDGDGDDD
DDDAMEVDDITEELKDKLRKRLGAPLSEIVLAQGDAKDIVKGIFFGEVS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggatacaagagttccgttgtcacattccttatggtctccatatgacactgttaaggat
tcagccgactcgatgggaatcaatctccctgatgaatcggcaaagaatttggccatggat
gtcgaatacagaatccatgagattctcgaacttgcaatcaaattcatgcgtcattcgaag
cgcaagactcttatgactaccgatattgactatgcgttgaaagtgcttaatgtggagcca
ttatatgggtacgataactcacagccattaacatttaaggaaactatggttggcgcagga
ggtcaaacactatactatatcgatgaccacgaagttgagtttgaaaaattgatcaaccag
gaattgccaaaaatcccacgtaagactacatttactgcacattggcttgctattgaaggt
gtacagcccatggtacctcaaaatccacttccatctgaaatcaaaaatctaccgccagcc
gttagaggagcaacatcaactttcttgggtaacgacgtcttggcacttggtgtatctaat
gatggtaaagatggtggcggtagtggtggtgttggtgtgtcaaagaagaaagcgggaacg
gcaacatcaacatcaacaacggaacgagatttcgaaactaaaccgttggttaaacatgta
ttatcaaaagaactcaaattgtattttgataaagtggtggaggtgttggtgagttctgac
ccagagaaggaaagtttaaagaatgctgccttgacgtcattaaagtctgatccaggtttg
caccagttggtgccatattttattcaatttgtggctgaacaaattacaaaccaattacga
aatattgagattttgtcaactatgcttgaagtcatctctgcgttggctgataacaggaca
atttttttggacccctatgttcatgctttgatgccctgtatacttacattgcttcttgcc
aaacgaattggccctgtagtgaaggacaattcgcctgaatgcgaagacacgctcagaagc
cagttggcaatacgagagtttgctgctatattgttggagcacgttatcaagacttatgga
tcatcatattcgacacttcgtcctagagtcacaagaaccttattgcgagcgttactagac
tcgacaaagcctgtgggaacacactatggagcattattgggactcaaaaatctcggaagc
gaagtgctcaaacttgtcttagtgggcaatttgaaagtatggtacaggaccatcattgaa
gaaaatgagctggagctagagaaggagattttagttaacacggttatagacattcttaga
agcttaaaagtgaatcttgagattggtggtgtcagtaatggtaatggtactgataataac
aagaatgattatgttaataataataacaatactaataaagatggtgatggtgatgatgat
gatgatgatgcgatggaagtagatgatatcacagaagaattaaaagacaaattacgcaaa
aggttgggagcgccactttcagaaattgttttagcgcaaggagatgcaaaggacatagtt
aaaggtattttctttggcgaggttagttag
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