Lodderomyces elongisporus: PVL30_003941
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Entry
PVL30_003941 CDS
T01116
Symbol
TFG1
Name
(RefSeq) transcription factor IIF subunit tfg1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
lel
Lodderomyces elongisporus
Pathway
lel03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PVL30_003941 (TFG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lel03021
]
PVL30_003941 (TFG1)
Transcription machinery [BR:
lel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
PVL30_003941 (TFG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
5231751
NCBI-ProteinID:
XP_001524245
UniProt:
A5E3M8
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Position
5:complement(171315..173366)
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AA seq
683 aa
AA seq
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MSQQVPQVKTEPGIKKEPGTENNEEWQTIPLKSYGPEDVDENTRIHIMKLISRNDVNIVK
DFEKPVRLHRKDPRNMQFHLTRQELDQRKREKEEAEKQNATKQETKKGKGEGKDKDKGKG
KDKENENENENGGENEKEQEEGNTEGDGKSDVKSDKAKEEIKSKIAPEEGKLMRGQADLS
QVAPDGGARKNKKNLFKRKTKQINLMDEAKRKLRYEEHYPWVIEDYTGKNVYVGNYEAGS
TESSHVLFVFDKDGFKMIPAEKVYRFTPRNKYATLTLEEAEQKMEKNSSVPRWLMKHIEN
DSIAEGSPDQRFRNNSPSANGRVINDNTRGRRMRTVIGGSSSSGHTNSGSGKDRDSDHDD
LDFEEEFADDEEAPIMDGDEEENKMSERKIKKEMLRAAHLNADEDADVEDDLDDLFETEK
SRKVDKEGKKLKKMLNKREGGIYDSDDEERELLPYLSKSDLESDEESDNEIKVKQEPNQE
EAGSGATSGPGAGESVGPAMRHITAAYLGDGFVTISAPKEFLSTFPAGEWVPNGRKRPTS
PIGVEMASPQKKSKTGNVSSSDKDKDIDKDNKNNNDNNKENENNASMNTVTVKREPSREP
VSRSASPVNAEGSTYDLNDAGPSNLLVTVNEILSIVKDRPLTTKELLLGLKNRISAHADN
KQRIIAIVKQNLKLVDGKLALRE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacaagtgccacaagtcaagactgagcccggtattaagaaggaacctggaact
gaaaacaatgaggaatggcaaactattcctctaaagtcgtatggacctgaagatgtagat
gaaaacacacggatccacattatgaaacttatttctagaaacgatgtaaatatagtaaag
gattttgagaagcctgttagacttcatagaaaggatccaaggaacatgcagtttcatctc
acacgtcaagaattggatcaacgaaaaagagaaaaggaagaggcagagaaacaaaatgca
accaaacaagaaaccaagaaaggaaagggcgagggcaaagacaaggacaaaggcaaagga
aaagacaaagaaaatgaaaatgaaaatgaaaatggaggagaaaatgaaaaagaacaagaa
gagggcaatacagagggtgatggtaagtctgatgtcaaaagtgacaaagctaaagaagaa
ataaagagtaagatagcaccagaggaggggaaactcatgagaggtcaagccgatttgtct
caagtggcaccagatggaggtgctcgtaagaataagaaaaacttgttcaagagaaagaca
aaacaaataaatttgatggacgaggcgaaaaggaaacttagatacgaagaacattatcca
tgggttattgaagattacacgggtaagaatgtttatgtggggaactatgaagcaggatca
acagagctgctgcacgtactttttgtatttgataaagatggtttcaagatgatcccagcc
gagaaagtttatagatttacaccaagaaacaagtatgctacattgacattggaagaagcc
gagcagaaaatggagaaaaactcgagcgtgcctagatggttaatgaagcacattgaaaat
gattccatcgctgaaggttcaccagatcaaagatttagaaacaactcgccatctgctaat
gggcgtgtaatcaatgacaatacacgaggcagaagaatgagaactgtgattggtggcagt
agcagcagtggtcacaccaacagtggatctggtaaagatagagattcagaccatgatgat
ttggattttgaagaagagtttgcagacgacgaagaagcgccaattatggatggagatgaa
gaagaaaataaaatgtcagagagaaaaatcaagaaagaaatgctcagagctgcacacttg
aatgctgatgaagatgccgacgtggaggatgatttggatgatttgtttgaaacagaaaag
tcaagaaaagttgataaggaaggtaagaaattgaagaagatgttgaacaaaagagaaggt
ggaatttatgatagtgatgacgaagagcgtgagcttttgccatacttgtccaagtctgat
ttggaaagcgatgaagaaagtgataatgaaattaaggtgaaacaagaaccgaatcaagaa
gaagctggtagcggtgctacttcaggaccgggagcaggagaaagtgtaggtccagctatg
cgacatatcactgctgcatacttgggagatggatttgttactatcctggcgccaaaagag
tttcttagcacattccctgcaggtgaatgggtaccaaatggaaggaaacgtcctactagt
cctattggtgtagagatggcttctccacaaaaaaagagcaagactggaaacgtcagcagc
agtgataaagacaaagacatagacaaagacaataaaaataacaatgacaataataaagag
aatgagaataatgctctgatgaatactgtcactgtcaagagggagccatcaagagaacca
gtatcaagatcagcctcaccagtcaatgcagaaggctctacttatgatttgaatgatgca
gggccatctaatttgttggtgacagtaaatgaaatcttgagtattgtcaaggaccgtcct
cttactacaaaggagttgcttttgggactcaagaatagaatcagtgcccatgcggataac
aaacagagaattattgctattgttaagcaaaatttgaaacttgttgatggtaaactagca
cttagggaataa
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