Lodderomyces elongisporus: PVL30_004569
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Entry
PVL30_004569 CDS
T01116
Symbol
EXO1
Name
(RefSeq) Rad2 nuclease
KO
K10746
exonuclease 1 [EC:3.1.-.-]
Organism
lel
Lodderomyces elongisporus
Pathway
lel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PVL30_004569 (EXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lel03032
]
PVL30_004569 (EXO1)
03400 DNA repair and recombination proteins [BR:
lel03400
]
PVL30_004569 (EXO1)
DNA replication proteins [BR:
lel03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
PVL30_004569 (EXO1)
DNA repair and recombination proteins [BR:
lel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
PVL30_004569 (EXO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
5231999
NCBI-ProteinID:
XP_001524709
UniProt:
A5E2A4
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All DBs
Position
6:209255..211657
Genome browser
AA seq
800 aa
AA seq
DB search
MGVNGLLPLLKSIHDPCSLERYRGKTLAIDTYGWLHRAVVSCAEDLCLGRPTRRYVTYVR
NKIAMLQDFQITPYFVFDGASLRTKAQTNDERRKSRKEALALAQQYAKSGRSDLAGKQYM
KAACVTSQMAKSIMCELDLLKIKYVVAPYEADPQMVYLEKIGLVDGILSEDSDLLIFGCR
KLITKLKDDSTCVEIDRHNFKNVANMSYLGNFSESQLRLAAMLSGCDYTKGVQGIGLKSS
VQLVRKYIYLQKVILAIKASGKMVPDNLEDDIYRADLAFQFQKVFDPRSQKLTTLNELPE
ELEVDVEILEMYCGRCIDDRLIQHVCNGVIDPNTHEPLISRDQSLSLLKSHSLRMGMSSV
TTTTYKNNNSNDNNNNNNIKINQSLSSMNCRVARRSQSETIGKGSPNSILDMLSFSKCSP
KRTKRRLEAEADITVQLELEAKEKARVKTSTNRNTNTSTNTSTEHEQHNATFREPDLPLK
KIFFDKSRLRNDTSPTSKKLKKLQSPLSLQKTPTTTSKYFSAPKVKEVENDEDPEIWNSS
FFEDSEIPESSPKFGFDTRDILADYEKDTVSTNVDDAKIEIETETEAEDELGNENGNENE
NENENENETTTIDADGDGDEQIVDSLPNFDSMIVDVAPISISRSKVRRMQTTKKQETRRE
FEVANTDDDNDYDDDDEIEESPIRKDYSQNTSTIRTQVDFKALRSAFQCHTDNFNLPLGQ
KPHKPQAQLSQKHSDYRKKRPALQDKPVNTMPKSIQKVAAHIRDNTESRKCEIEKKVRFK
TKSPSPKRVCKRIDLKQFVY
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttaatggacttcttccactactaaaaagtatacacgatccatgttctttagag
aggtatagaggaaaaacattggccattgatacatatggctggctacatcgagctgtggtt
tcgtgtgctgaggatctttgtcttggtaggccaacaagacgatacgtcacatacgtgcgt
aacaagatcgcaatgctccaggattttcaaataacaccgtactttgtattcgatggagca
tcattgagaacgaaagcgcaaacgaatgacgagagaagaaaatcgcgtaaagaagcattg
gcgttagcgcaacagtatgccaagctgggtaggtcggacttggcaggaaagcagtatatg
aaagctgcatgcgttacctcgcagatggcgaaactgatcatgtgcgaattagatctttta
aaaattaagtatgttgttgcgccgtacgaagctgacccacaaatggtatacttggagaaa
ataggattggtagatggcatattgagtgaggattcggatttgcttatatttgggtgtcgg
aaattgatcactaaattgaaagatgattcaacatgcgttgagattgataggcacaacttt
aagaatgttgccaacatgtcctatctaggtaactttagtgagtcgcaactaagactcgca
gcaatgttatcaggctgtgactatactaaaggtgtccaaggtataggactcaagtcgtca
gttcaattagtgcgaaaatatatttatttgcaaaaagtcattttggctattaaagcttca
ggcaagatggttccagataaccttgaagatgatatctatagagcagatcttgcatttcaa
tttcaaaaagtctttgatccgcgaagtcaaaagttgacaactttaaatgagttacccgag
gagctcgaagttgatgtcgaaatccttgaaatgtattgcggtagatgcatagacgatcga
ttgattcaacacgtttgcaacggtgtaattgaccctaatacgcatgagccgctcatttct
cgagaccaaagtctatctttgctcaaatcgcattcgctcaggatgggaatgagcagcgtt
actactactacttataaaaataataacagcaatgataataataataacaacaatatcaaa
attaaccagagtttgagttcaatgaactgcagagttgctaggcgttcacaatcggaaact
attggaaagggatctccaaattcaatactagatatgcttagtttcagcaagtgtagccct
aagcgtactaaaagacgcctcgaagcggaagcagatattacggtacaattggaacttgaa
gccaaagaaaaagcaagagtgaaaacaagcacaaacagaaacacaaacacaagcacaaac
acaagcacagaacacgagcaacacaatgcaacctttagagaacctgatctaccacttaaa
aagatattttttgataaatcaagactcagaaatgatacttcgcccacttctaaaaaattg
aaaaaattacagtcaccattatcgttgcaaaaaaccccgacaacgacaagtaaatatttt
agtgcgccaaaagtgaaggaagttgaaaatgacgaggatccagagatttggaattccagt
ttctttgaagactctgagattccagaatcgtcgcccaaatttggattcgatacgagagat
atattagccgattatgagaaggacaccgtttcaacaaatgtggatgatgccaaaatcgaa
atcgaaactgaaactgaagctgaagatgaacttggaaatgaaaatggaaatgaaaatgaa
aatgaaaatgaaaatgaaaatgagactacaacaatagatgcagatggggatggtgatgaa
cagattgtagattcacttccaaattttgattctatgatagtggacgtcgctccgattagt
atactgcgaagcaaagttcgaagaatgcaaactacaaagaaacaggaaacacgcagggag
tttgaagttgcaaatactgatgacgacaatgattacgatgatgatgacgaaatcgaagaa
tcacctataagaaaagactattcgcagaatacaagcacaataagaacacaagttgatttt
aaggcacttagatctgctttccagtgtcacaccgataatttcaatctaccactcggtcaa
aagccgcataagccacaagcccagttgtctcagaagcatagcgattatcgcaaaaaaaga
ccagctttacaagacaaaccagtaaataccatgccaaagtcgattcaaaaagttgctgca
catattagagacaatactgagtcgagaaagtgcgaaattgaaaaaaaagtgcgtttcaaa
actaaaagtccactgccaaaacgagtttgcaaacggatagacttgaagcaatttgtatat
taa
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