Lodderomyces elongisporus: PVL30_004612
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Entry
PVL30_004612 CDS
T01116
Name
(RefSeq) uncharacterized protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
lel
Lodderomyces elongisporus
Pathway
lel03013
Nucleocytoplasmic transport
lel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PVL30_004612
03015 mRNA surveillance pathway
PVL30_004612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lel03019
]
PVL30_004612
03041 Spliceosome [BR:
lel03041
]
PVL30_004612
Messenger RNA biogenesis [BR:
lel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PVL30_004612
Spliceosome [BR:
lel03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
PVL30_004612
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
CUEDC2_N
Motif
Other DBs
NCBI-GeneID:
5232171
NCBI-ProteinID:
XP_001524754
UniProt:
A5E2E9
LinkDB
All DBs
Position
6:complement(324829..325542)
Genome browser
AA seq
237 aa
AA seq
DB search
MMNVSSTNTSVSKNAMKCFSTPIFRSKFRLQQLKPWIVTTTQSYLGGINDEIVVEYIYEL
IGSDDEMVDQDQVVDMSNLNEQLCEFLGKRESLQFCQKLWKLMYELSKGNTPDELKVQKK
KLELKNVEKEDVHEKEKKGYKRRNDIATDKERERERIVDKGSRGVGGERRRTNYNRSSRT
NVPGDRESFQRSDDNRNSYGKYNGYRSRYERNERDERDERDERDREYSKYRSNRYIM
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacgtctcttccaccaatacatccgtttcaaagaatgcaatgaaatgctttctg
accccaatatttagatccaagttccgcttacagcaactaaaaccatggatagttacaacc
acccagtcatatcttggtggaatcaacgatgaaatcgttgttgaatacatttacgagctc
ataggttcagatgacgaaatggtagaccaggatcaagtagtagatatgtcgaacttgaat
gaacaactttgcgagtttttggggaagcgggaatcactacagttttgtcaaaaattatgg
aaattaatgtatgaattgctgaagggtaatacacctgatgaattgaaagtgcaaaagaaa
aaattggagttgaaaaacgttgaaaaggaagatgttcatgagaaggagaagaagggatac
aaaagaagaaatgatattgctacagataaggaacgcgaaagagaacggatagtagacaaa
ggaagtagaggcgtaggcggagagaggcgaaggaccaactataatcgtagtagcagaact
aatgtacctggagacagagaaagttttcaaagactggacgataacaggaatagttacgga
aagtataacggataccgatcgaggtatgaaagaaatgaaagagatgaaagagatgaaaga
gatgaaagagatagagaatatagcaagtatagaagcaatcgatatattatgtag
DBGET
integrated database retrieval system