Lodderomyces elongisporus: PVL30_004999
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Entry
PVL30_004999 CDS
T01116
Name
(RefSeq) uncharacterized protein
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
lel
Lodderomyces elongisporus
Pathway
lel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVL30_004999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lel03019
]
PVL30_004999
Enzymes [BR:
lel01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
PVL30_004999
Messenger RNA biogenesis [BR:
lel03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
PVL30_004999
3'-5' decay
Other 3'-5' decay factors
PVL30_004999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
DcpS
Hema_HEFG
FERM_C_FAK1
Motif
Other DBs
NCBI-GeneID:
5230441
NCBI-ProteinID:
XP_001523233
UniProt:
A5E770
LinkDB
All DBs
Position
7:complement(78534..79574)
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AA seq
346 aa
AA seq
DB search
MEQESNSSITENSTSSQAGNDHLTSSLLEPTAIAKDENEEKQHNLLQLVSEFQYEKLLNS
NTQTKTIILLGSIGSKQAIVIIEKSHFIAENLTNGLDKVVEDAEIINSNDIYTWAKTILY
QNLKDQPAAKLNLIYPATETHIRKYAGQKVHYIRESPEMYRDYVVPYIETMKGDKLQWVY
NILYHGKEAETVIYHDKSPQGFVLLPDMKWDGINMENLYLCCIVNRQDIASIRDLRGEDH
LTWLAGIRNKIIDVCKQKYELSVDGLRIFVHYQPSYYHFHIHVVTVKHPGLGDGANIGKA
ILLDDIIDNLTLDPGYYKKKTIGYVLGENHGLWQVEGYREAHHQNQ
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagaatctaacagttcaatcaccgagaactctacctcatctcaagcaggcaat
gaccatctaacctcctctttgttggaacctaccgcaattgctaaagatgagaacgaggaa
aaacaacacaatctattacaactagtatccgagtttcaatatgaaaagcttttaaattca
aacacacaaaccaaaacaattattcttttgggctctataggctcgaaacaagcgattgtt
attattgaaaaatcacactttatagctgaaaacttgacaaatggattagacaaggtggtt
gaagatgcggaaatcattaatagtaatgacatctatacatgggccaaaaccatcttatat
cagaatctcaaggaccaaccagcggccaagttgaatttgatctatcctgcaaccgaaacc
catattcgtaagtatgcaggtcaaaaagttcattatatcagagaaagtcccgaaatgtat
agggattatgttgttccatacatagagacaatgaaaggcgataagttacaatgggtatat
aacattttgtaccatggcaaagaagccgagaccgtaatctatcatgacaaaagcccacaa
ggatttgtacttttgcccgatatgaaatgggacggaataaatatggagaacttgtatctt
tgttgtattgtgaatagacaagacattgcttcaataagagacttacgaggagaagatcac
ttgacttggctagcaggaatccgaaacaagatcattgatgtatgtaagcaaaagtatgag
ttgtcagtagatggattgagaatatttgtgcactatcagcctagttattaccacttccat
atccatgtggtcactgtgaagcacccaggtttaggtgatggggctaatattggcaaggcg
atcttgcttgatgatatcatcgacaacttgacattggatccaggatattacaagaaaaag
accattggatacgttcttggtgagaaccatggattgtggcaagtagaaggttatagggaa
gcacatcaccaaaaccaataa
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