Lodderomyces elongisporus: PVL30_005063
Help
Entry
PVL30_005063 CDS
T01116
Symbol
CTR9
Name
(RefSeq) protein required for normal CLN1 and CLN2 G1 cyclin expression
KO
K15176
RNA polymerase-associated protein CTR9
Organism
lel
Lodderomyces elongisporus
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lel03021
]
PVL30_005063 (CTR9)
Transcription machinery [BR:
lel03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
PVL30_005063 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_16
TPR_19
TPR_12
TPR_8
TPR_17
TPR_CcmH_CycH
TPR_Slam
ANAPC3
ARM_TT21_C
MMR_HSR1
ABC_tran
Motif
Other DBs
NCBI-GeneID:
5230376
NCBI-ProteinID:
XP_001523298
UniProt:
A5E7D5
LinkDB
All DBs
Position
7:259792..263379
Genome browser
AA seq
1195 aa
AA seq
DB search
MDEALDISYYIGQDGVEALKNVDVPVEGGDVVSLDLTNAEELPQDPQELVSFFTDNKSGK
QFWIIVACAYAQLGKLAEAVQLIKSALETSYFTEEDKKTFESVLIWLYFRYASVDAQNGD
RSENLVLASSAISSLKTKIYNDSQTSVTNSVSNLLAEAVLAIYQNHDDEAMEIFDRVLKL
DHSNCFALLGKAHVTLSKSNNYTLALKLYQQVLLLNPVMKPDPRLGIGLCFWFLKDEKMA
KQSWERALEIDPKNIKAKIFLSLTKIYATLNNSLSDEQFLKDYKECLQEVSQLHKGNVTD
STILLVLVSYYFAKQEYDTVERVVKHISQHIIGDSSVSKSATLITKLSKHQQIVLSECST
WLARVQFAREDFTQASKLFQEAIKFNDQNLVAKLGLGQSQFNRGSIEEASLTYESILRTN
VDCLEANYSLGILYAKQQSDSRRKKELAIQVLERYIRLSNNRGLSSASKNDAHMLLNKEP
ITLNAYLTLSKLYEDTDLNQSLTYLTRAADARKKLGKKIPLEIYNNLGVFKFTKQNFAGA
AESFQSALDELNAATEFKSADGEDVLIDLPQDLKISLSFNLARSKEVSNENEAYQTYESL
IQECPNYFSAKLRILFLSCISESRLSTDEIKTEIDELLDLNVSDLEVRSFYGWFVKNFGK
KLGMKPDSDVEFQKDTLVEFDKHDCYALLSLANIYCVMARDLKNSSSTESKKKNYYIRAI
ELYTKVLTVDPKNVYAAQGLAIAYIENKESFKGLDILRKIRDSLNDISVYLNLGHVLCEV
KQFGKAIESYELALARYTDGKDVKILTFLGRAWYLRASNEQNLQFFKRGLEYSRQALEHT
RGSKSALLFNIAYVQFQIADFVSKQPVHHRQPQDISDAIDGLQDAIQTLLQLASEDEKHP
PYPKDELRGRANLGSSTLLNRLTSALDETKENIASVEQKLQTAKHIREQEKEAKIKEEQA
RLEMLKEKEAQLAKERAALQEQAQQWAEEARSNIAVQAEDDKSDGDNDDDDDDEEGDDGG
LFNEEKGRGKRVKNSSGRKGKPKKSRKKKVLEDSESEPEADFSGDEDNNYSNDGNDGHDD
GVNDRNETRVVKKDLEVKPKKKANRKRKLRVSDDEEENDENEDGGNEKGAVTGRVNGSKR
GKKKQHLSNEFIEDSDEELENDDLFGDEGVEKEDNDKDGENDRDKEKEARGQESE
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagctcttgatatatcatactacattgggcaggatggagtggaggcacttaaa
aacgtcgatgttcccgttgaaggaggtgatgttgtctcattggatcttacgaatgccgaa
gaacttccccaagaccctcaagagttggtcctgttttttaccgataacaagctggggaag
cagttctggataattgttgcttgtgcgtatgcacaactaggtaaactagcagaggcagta
caactcatcaagctggctctagaaactagctatttcactgaagaagacaaaaagacgttt
gaaagtgtacttatctggctatactttaggtatgcatccgttgatgcacagaacggtgac
cgtctggagaacttggttcttgcgagctctgcgatctcgagcttgaaaacaaagatatat
aatgactcacagacctcagttaccaacagtgtgtctaatttacttgctgaggcagttttg
gccatttatcaaaaccacgatgacgaggcaatggagattttcgatagagtcctcaagtta
gaccacagtaattgttttgcgctattggggaaggcgcatgtgacgttgtcaaaactgaac
aactatacattggcgttaaaactataccaacaggttttacttttaaaccctgtaatgaaa
ccagatcctagactaggaatcggtttgtgtttttggtttttgaaagacgagaaaatggct
aagcagagctgggaaagagctttggaaatagatccaaagaatattaaggctaaaattttc
ttgagtttgacgaaaatatatgccacattgaacaattctctcagtgatgaacaatttttg
aaggactacaaagagtgtttgcaagaggtatcacagctccataaaggtaatgtgactgac
tctacgatattgcttgttcttgtgtcgtactattttgccaagcaagaatatgacaccgtg
gaacgagtagtgaaacatatttctcagcatattattggtgatagcagtgtatccaaatct
gctacactcattactaagctttctaagcatcagcaaatagttttatcagagtgtagcacc
tggctcgctagagtgcagtttgcccgtgaggactttacgcaagcatcaaagcttttccaa
gaagctataaaattcaacgatcaaaatttggttgccaagttggggcttggtcaatcgcaa
ttcaatcgtggctccattgaagaagcgagcttgacatatgagtcgatcttgagaaccaac
gtcgattgccttgaagccaattactcacttggtattttatatgcaaaacaacaactggat
tcgagaaggaaaaaggagttggctatccaggtacttgaacgatatatcagactctccaat
aacagagggttatcatcagcatccaagaatgatgcgcatatgctcctcaacaaggaacca
attacattaaatgcgtatttgacattgagtaaattgtacgaggacaccgacttgaaccaa
tcgttgacttatttgaccagagctgctgatgctaggaagaagttgggcaagaagattcca
ttggagatttataacaacttgggtgtgtttaagttcaccaagcaaaatttcgcaggtgcg
gcggaaagtttccaactggcacttgatgagcttaatgcggcaacagaattcaaatcagct
gatggagaagatgtattgattgatttgcctcaggatctcaagatctcactttcatttaat
ttggcaagatcaaaggaagtgtcaaacgagaatgaagcgtaccagacatacgaatcactc
attcaggaatgtcccaactatttctctgcaaagcttcgtattttattcctttcgtgcatc
tccgaatctcgtttatctacagatgaaatcaaaaccgaaattgatgagcttttggacttg
aatgtgctggaccttgaagtccgatcgttttatggttggtttgttaaaaactttggtaaa
aagttggggatgaagccggattcggatgttgagtttcaaaaagatactcttgttgagttt
gataaacacgattgttatgccttgctctcgttggcaaacatttattgtgtcatggctcgt
gatttaaaaaattcatcaagcactgagctgaagaagaaaaattattacattagagccatt
gaattgtataccaaggtgttaacagtggatccgaagaacgtttatgcagcacaaggcttg
gcaattgcctatatcgaaaacaaggaatcgtttaaaggtttggatattttaagaaaaatt
agagactcgcttaatgacatttcagtctatctcaatcttggtcacgtgctatgcgaagtg
aaacagtttggaaaagcaattgagagttacgaactagcattggccaggtacactgatggt
aaggatgtcaagatccttaccttccttggcagagcatggtacttacgtgcgtccaacgag
cagaacttgcaattttttaaacgaggacttgaatactcaagacaggcattggaacatact
cgaggttctaaatcggcgttgttattcaatattgcttacgtgcagtttcaaatagcggat
tttgtcagcaagcaaccagtgcaccaccgtcaaccgcaagatataagtgacgcgattgat
ggattacaagatgctattcagactttgctccagcttgcatcagaagatgagaaacatcca
ccttaccccaaagatgagttgcgcggtagagcaaatcttggatcaagcacattactcaat
agactcactagtgcacttgatgagactaaggagaatatagcctcagtggaacagaaactc
caaacagcaaaacatattcgtgagcaagagaaagaggcaaaaatcaaggaggagcaagcc
agactcgagatgttgaaagagaaagaggcgcagttggcaaaggaaagagcagcgttacaa
gaacaggctcagcagtgggctgaagaggcaagactgaatattgcagttcaagcggaagat
gacaaaagtgatggtgacaatgatgatgatgatgatgatgaagaaggtgatgatggtggt
ttgtttaacgaggaaaagggtagaggtaaacgagttaagaacagtagtggcagaaaaggc
aaacccaagaaaagcagaaagaagaaagttcttgaggatagtgaaagtgaaccggaggct
gatttttctggcgatgaggataataattatagtaatgacggtaatgatggtcacgacgat
ggcgtgaatgatagaaacgagaccagggttgtgaagaaagatctcgaggtcaaacctaaa
aagaaagcaaacagaaagagaaaacttagagttagcgatgatgaagaagaaaatgatgag
aatgaagatggtggaaatgaaaagggggcagtgacaggcagagttaatggatctaaaaga
ggcaagaagaaacaacacttgtcgaatgaatttattgaggatagtgatgaggaattagaa
aatgatgatttatttggtgatgaaggagtcgaaaaggaggacaatgataaggacggggaa
aatgacagagacaaagaaaaagaagctagaggacaagagagtgaataa
DBGET
integrated database retrieval system