Lodderomyces elongisporus: PVL30_005198
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Entry
PVL30_005198 CDS
T01116
Symbol
RTF1
Name
(RefSeq) RNA polymerase-associated protein rtf1
KO
K15178
RNA polymerase-associated protein RTF1
Organism
lel
Lodderomyces elongisporus
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lel03021
]
PVL30_005198 (RTF1)
Transcription machinery [BR:
lel03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
PVL30_005198 (RTF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
5230766
NCBI-ProteinID:
XP_001523643
UniProt:
A5E620
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Position
7:complement(716779..718596)
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AA seq
605 aa
AA seq
DB search
MSDLEDDLLALAGGDEYDSEADVPTTRTTSKSRSTYNGSGNGNGGGDESESDDEDTVLAK
KRRRVDSGSNDYDDEVEGRLSPENDDEDDDEEDEEEDDYDPDAGTGYEPEENETELVNPY
PIDGKYKDEADRDELEAMDEMKREEILFERSQEMDKYNERRFLQQRIKKQQQQQQQQQLN
RSDEKLRTSSRNKTVGARSHKENKLSELKKQREKHSRKRTRAQDDYDDDDDDAEEDSDDS
GLGEEELSGEEAYEDDEFDEFNKGGVSWGGVSKTKRKKSTEPGKYEDILRISMTRSVLAQ
YCYHPNFQNVMIGTYAKVAVSFDRHTGRQFYRMVKIEDIRARPEKPFRIGNSKYDMYFLV
SQNREQKMPFPMSTFSDSIITREEYDKYLGELAKTGESIDLLDDIKEKVSELSKFYKTGI
TDKDINERIARKQQMQQKKGAYTAFEAVQAKSRLMEELKIFKQRGDLEGTQRIINELKHI
DEILDQKTSSSTSQSQIQSIAKVNERNRKLNSTNIRKAELKFKTDASTASFDGGDPFSRL
KTNTRMFYQDLINRENAKALQDVNMQKLIDEKSKQEEQIAQSTYRDLGEMDKLIRSIDID
IELMI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatttagaagatgacttattggcgttagcaggaggcgatgaatacgactccgag
gctgacgtacccaccacaagaacaacatcaaagagtcgatcgacttataatggtagtggt
aatggtaatggcggtggtgatgagtctgaaagtgatgacgaagatactgttttggccaag
aagcgtcgtagagttgactctggaagcaatgattacgatgatgaagttgagggtagatta
agtcctgaaaatgatgatgaagacgacgacgaagaggacgaagaagaagacgattatgac
cccgatgcaggtactggatacgaacccgaggagaatgaaaccgaattggtgaatccatat
ccaatcgatggtaagtataaggatgaggcggatcgtgacgagttggaagcaatggatgaa
atgaagagagaggagattttgtttgaaagatcgcaggagatggataaatacaatgagcgt
aggtttttacaacagaggatcaaaaagcaacagcagcagcagcaacaacaacaacttaat
aggtccgatgagaagttgaggacgtctagtcgaaacaagactgttggtgcgaggtcacac
aaggagaataagttgagtgaattgaagaagcagagagaaaaacattcgagaaaacggact
agagcacaagatgactatgatgatgatgatgatgatgcagaggaagattctgatgactcg
gggttaggtgaagaggagttgctgggtgaagaggcttacgaagatgatgagtttgatgag
tttaataaaggtggtgtttcttggggtggtgtttccaagacgaagcgtaagaagctgact
gagccaggtaaatacgaggatattttacgaataagtatgactcgaagtgtgcttgcgcaa
tactgctatcatccgaactttcaaaacgtcatgattggaacatatgccaaagttgctgtt
tcttttgataggcatacggggagacagttttataggatggtgaagattgaggatattcgt
gctaggccggagaagccattccgcattgggaattctaaatatgacatgtatttcttggtg
agtcaaaacagagagcagaagatgccttttcccatgagtacgttttctgattctattatt
accagagaagagtatgataagtatcttggggagcttgccaagactggtgagagcattgat
ttgcttgatgatataaaggagaaggttctggagttgagtaagttctacaaaacgggtatt
acggataaggatatcaatgagcgtattgctaggaagcagcagatgcaacaaaagaagggt
gcatacactgcatttgaggctgtgcaggcgaaatcgaggttaatggaggagctcaagatt
ttcaagcaacggggagatttggaaggaacgcagcggattatcaatgagttgaagcatatt
gatgagattttggatcaaaagacactgtctagtacatctcaatcgcagattcagagtatt
gccaaggtcaatgagcgaaatagaaagttgaattcgacgaatattaggaaggccgagctc
aagtttaagacagatgcgtcaacggcgtcgtttgatggtggtgatccgttttcgaggttg
aagacaaacacgaggatgttttatcaggatttgatcaatcgtgagaatgcaaaagcgttg
caggatgttaatatgcagaagttgattgatgagaagtcgaagcaagaggagcaaattgcc
caatcgacgtatagagatttgggtgagatggataaattgattagactgattgacattgat
attgagttgatgatttag
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