Lodderomyces elongisporus: PVL30_005367
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Entry
PVL30_005367 CDS
T01116
Symbol
NDC1
Name
(RefSeq) Nuclear pore complex subunit
KO
K14315
nucleoporin NDC1
Organism
lel
Lodderomyces elongisporus
Pathway
lel03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PVL30_005367 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lel03019
]
PVL30_005367 (NDC1)
Messenger RNA biogenesis [BR:
lel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PVL30_005367 (NDC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
5230950
NCBI-ProteinID:
XP_001523818
UniProt:
A5E4U2
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Position
8:complement(28489..30441)
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AA seq
650 aa
AA seq
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MSEPAPKHIAKDEYHRLFKKVYNKRLNYVLNVNIILSIILIFLLDLHHASSWVSWNQILV
SLFVKGPLFFTALTMIRQARKGFSTVEYSSHKTLATQVYHSLFSKTFIHITLFHVVSAIL
FYGVFIFNLPFTFDYYLVSKEYRQNPQLNDEWVQYWVSSIMLAAFYSANQLIFQRNRLCF
EIGNFRNKLEKTLFSHVPQAVGNALGLNIVFTFANPFIYWIIKPYLYKVLFPLALIGIDT
TLPPRNTTFATYFKVAYLSFTVLLSWEFANHVFDVYATIGCLDGDKPISSYSPEPLKCLI
SGLSNVSSTHELSRLTAFQELSYLATSRDKEAIKMRLALFSARGKKEDIWPALYEECSLV
IREASDAISHRSLHDIKARDVGKKVRYLDEDEDDSKIFGNSYTYSSLRSTTSSGASSGAS
SGASSGANSGASGTTTRGNIARSNEKLSNNTKRSIENKLWHIWNKEVTLPLQSLIKTYVP
PTIRKQIASFKIDTVIYEYKNQFLQTKAGLIFRITVKRDAESRVRNPVNVGNAIISLSNL
LQRSVEEDLWAIVSPADITSTLNIFERIVSTSTNYVDLPPASIYTKGQSRKSLIYHIRNL
AMHEFYELCVQFNSQLNDLNLSQKTYKLAKWVIDIVIAEKQQSERRGLAI
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgctggaaccagctcctaaacacattgccaaagacgagtatcatcgtcttttcaaaaaa
gtatacaataaacgactaaactacgtcctcaatgtcaatatcattttatccatcatcctc
atttttctactagacctccatcatgcatcctcttgggtttcttggaaccaaatcttggtc
tcattgtttgttaaagggccattgttctttactgctttaacaatgattagacaagcgagg
aaaggattttcaaccgtggaatactctctgcacaagacccttgcgactcaagtttaccac
tcattattttccaaaacattcatccacatcacattatttcacgttgtatcggctatcctt
ttctatggagtctttatcttcaatttgccatttacttttgattactatttggtgtccaaa
gagtatagacagaatccgcaattgaatgatgagtgggtccagtattgggtgagctcaatt
atgcttgctgctttctactcggcaaatcaattgatatttcaaagaaacagactctgcttc
gaaattggcaactttagaaacaaactcgagaaaactcttttttcacatgtgccacaagca
gtgggtaacgcccttggattaaacattgtattcacatttgcaaatcctttcatatattgg
atcatcaagccatacttgtataaagtattgttcccacttgccttgattggaatagatact
actttaccaccaagaaacactacatttgcaacatactttaaagtcgcctacttgtctttt
actgttttactcagttgggagtttgcaaatcacgttttcgatgtttatgcgactattggg
tgtctagatggcgataaacctatttcttcatacagccccgagcctttaaaatgtttgatt
tcggggctctctaatgtgtcatcaacccacgaattgagtagattgactgcattccaagag
ttatcttatcttgccactagcagggacaaagaagcaataaagatgcgtttagcgttgttc
agtgcacgtggaaagaaagaagatatatggcctgcgttgtatgaagaatgttcacttgtg
attcgagaggctagcgatgccattagccacagaagcttgcacgatatcaaggctagagat
gtaggtaaaaaagtgagatacttggatgaggatgaagatgatagtaaaatctttggcaac
tcctacacgtactccagcttacggtcaacaacaagttccggtgcaagttctggtgcaagt
tctggtgcaagttctggtgcaaattctggtgcaagtggaaccactaccaggggtaacatt
gcaaggtcaaacgagaaattatccaacaatacaaaacggtcgattgaaaataaattgtgg
catatatggaataaagaagttacactcccattgcaatcacttattaaaacgtacgtaccg
cctactatacgcaaacagattgctagtttcaagattgatacggtcatctatgaatacaaa
aaccaatttttgcaaacaaaagcagggttgatattcagaatcactgtaaagagagatgcc
gagtctagagtaagaaaccctgtgaatgttggtaatgccatcatttcgctttcaaattta
ctccaacgatctgttgaagaagatttatgggcaatagtttcgccagcagacattaccctg
accttgaacatttttgaacgcattgttagcacatctaccaattatgttgacttaccacct
gcatccatatacaccaaaggtcaatcaagaaagctgttgatttatcatatcagaaatttg
gctatgcatgagttttatgaactttgtgttcaattcaacagccagttgaatgacttgaac
ttgagccaaaagacctacaagttggcaaaatgggttattgatattgtcattgcagaaaag
caacagtcagaaagaagggggttggcaatttag
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