Lodderomyces elongisporus: PVL30_005507
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Entry
PVL30_005507 CDS
T01116
Symbol
CHC1
Name
(RefSeq) Clathrin heavy chain
KO
K04646
clathrin heavy chain
Organism
lel
Lodderomyces elongisporus
Pathway
lel04142
Lysosome
lel04144
Endocytosis
lel05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
PVL30_005507 (CHC1)
04142 Lysosome
PVL30_005507 (CHC1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
PVL30_005507 (CHC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lel04131
]
PVL30_005507 (CHC1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lel04147
]
PVL30_005507 (CHC1)
Membrane trafficking [BR:
lel04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
PVL30_005507 (CHC1)
Exosome [BR:
lel04147
]
Exosomal proteins
Proteins found in most exosomes
PVL30_005507 (CHC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_H_link
Clathrin_propel
Clathrin-link
TPR_COPA_B
Consortin_N
Motif
Other DBs
NCBI-GeneID:
5230908
NCBI-ProteinID:
XP_001523961
UniProt:
A5E585
LinkDB
All DBs
Position
8:444840..449870
Genome browser
AA seq
1676 aa
AA seq
DB search
MSDIPIDFTELAQLTSLGISASSLDFKSTTLESDRYVCCREQGPQGNTVAIVDLQNNNEV
TRKNMTADNAIMHPTENVISLRANGTTLQIFNLGTKQRLKAHTMNEPVIYWKWLDNKHLG
LVTQSSIYFWNVFDGTNDGPSKLTDRHHSLNNAQIINFVAEPDLNWFAVTGIAQEDGRIA
GHIQLYSKSRNVSQAIEGHVCKFASITLSGASHPTKVFCVGNKNAQGQGNMHIIEIDHVD
GNPPFQKKQVDIFFPPDASNDFPISLQASNKYGIIYILTKYGFIHLYDMETGANLFVNRI
TADPVFTATSYNNGTGILTVNKSGQVLSVEVSREKIIPYVLEKLSNVPLALALSSRGGFP
GAENLFTQQFQNYLNQGDYTNAAKVAASSEQLRTQDTINKLKHITPQPGQISPILQYFST
LLDRGTLNKYESIELAKPVLQQDRKPLFEKWLKEDKLTSSEELGDIVKSYNDTTLALAVY
IRANVNIKVVSCLAELGQFDKIVPYCEKVGYNPDFTNLIQNLVRVNPDKASEFATSLLAS
PATDSKLNVEQIADLFFSQNYIQQGTAFLLDALKNDSPSEGHLQTKVLEINLLHAPQVAD
AILGNQMFSHYDKPTIGKLCEKSGLFQRALEHYDDLKDIKRVIVHTNVLPSDWLVSYFGQ
LNVDQSIACLKELFSHNLQQNLQVIIQVATKYSDLIGPQKLIKLFEEYKCSEGLYYYLSS
IVNLTQDSDVVFKYIQAAARIGQTKEIERVVRDNNVYNGEKVKNFLKEFKLEDQLPLVIV
CDRFNFVHDLILYLYKNQYFKFIEVYVQSVNPSNTPQVIAGLLDVDCDEAVIKNLLMSVL
GRVPIKTLVEEVEKRNRLKILLPYLEKTLEGGSNDQEVYNALAKIYIDSNNSPEKFLQEN
NNYDTLVVGKYCEKRDPYLAYISYSKGGNDDELINITNENKMYKYQARYLLQKSDLDLWN
KVLGSDNIHRRQLVDQVISTGIPELDDPEPISITVKAFMENDLPEELMELLEKIILEPSA
FSENASLQGLMILTAIKADSSKVSGYIEKLDKFDPQEIAPLCIDNGLNEEAFEVYDKFEL
RSEAMNVLVESIVSLDRAEQYAEKYDTPELWYQLGTAQLDGLRIPEAIDSYIKSKNPENF
EQVIDIAEHAGKEEELLPYLEMARETLREPVIDGAIINAYATLDRLRDMESFVGGSNVAD
LETIGDKLFEAKNYKGAKILYSNVSKYSKLATTLVYLEDYQGAVDCARKASNISVWKQVN
NACIENKEFRLAQICGLNLIVDAEELPELVKTYEYNGYFNELISLFESGLGLERAHMGMF
TELAILYAKYTPEKVMEHLKLFWSRINIPKVLTACEDAHLYPELIFLYCHYEEWDNAALT
MIEKSEVAFDHSSFKEIIVKAPNLEIYYKAIQFYLNENPSLLVDLLSVLTPKLDLPRVVR
MFIKSDNLPMIKPFLISVLDKNNSVVNSAYHDLLIEEEDYKSLRSSIEHESNNRFNKLDL
AERLEKHDLIFFRQIAATLYAKEKKYNKAISILKADKLWSDLLKVVAISKSPKIARDILD
YFVETGNHECFVALLYTSYEYISHDYVMEVSWLHNLSNFIKPYEISIAYENQKKLNELYV
DLKKRQDAEKGDEESSKNGQAPLMLTNGPMSFQNTGLSSAPSLGFQPTGTGFGNAF
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatattccaattgatttcacggagttggcgcaactcacgctgttgggcatatcc
gcttcatcattggactttaaatcaaccacattagagtctgaccgctacgtatgttgtcgt
gagcaaggtcctcaaggtaacactgttgctattgttgatttgcagaacaacaatgaggtt
acaaggaaaaacatgactgccgataatgccatcatgcacccaactgagaatgtcattagt
ttgcgagctaatggtaccacgttgcagattttcaatttaggcactaagcaaagattgaaa
gcccacactatgaacgaaccagtgatatattggaaatggctagataacaaacatttgggg
ttggtcactcaatcactgatttatttctggaacgtgtttgatggtaccaatgatggacca
tcgaaattgacagatagacaccattcattgaacaatgcacaaatcatcaactttgttgct
gaaccagacttgaactggtttgcagtcactggtattgcccaagaagatggaagaattgct
ggtcacattcaattgtactcgaaatcaagaaatgtgtcccaagcaattgaaggccacgtt
tgtaaatttgcttcaattactttgagtggcgcttcacacccaactaaagtgttttgtgtt
ggtaataagaatgctcagggccaaggtaacatgcatattattgaaattgatcatgttgat
ggtaacccaccctttcaaaagaagcaagttgacatctttttcccaccggatgcttcaaat
gatttcccaatcagtttgcaagcttccaacaagtatggaatcatttatattttgaccaag
tatggtttcattcatttgtatgacatggaaactggtgcgaacttgtttgtcaatagaatc
actgccgacccagtgtttacagcgacaagctacaataacggaactggtatcctcaccgtg
aacaagtctggccaagtcttgagcgttgaagttagcagagaaaagatcataccatatgta
ttggaaaaattgtccaatgttcccttggcattggccttgtcttcgcgtggaggtttccca
ggtgcagaaaacttgtttactcaacaatttcaaaattaccttaaccaaggtgactacacc
aatgctgccaaagttgcagcatcttctgagcaattgcgaactcaagacaccatcaataaa
ttgaagcatatcactccacaacctggtcaaatctccccaatattgcaatatttttcaacc
ttgttggatcgtggaactttgaataagtatgagtctattgagttggccaaaccggtattg
caacaagaccgtaaaccattgtttgaaaaatggttaaaagaggacaagttgacttcgtca
gaagagttgggtgatatcgtcaaatcatacaatgacacaactttggcgttggctgtgtac
attagagccaatgtcaacattaaagttgtctcttgtttggccgagttgggtcaatttgat
aagattgttccatactgtgaaaaagttggttacaatccagatttcaccaacttgatccaa
aacttggtgagagttaaccctgataaggctagcgagtttgccacttcattattggccagt
cctgcaacagattccaaattgaatgtcgaacagattgccgatttgttcttttctcagaat
tatattcagcaaggaactgcattcttgttggatgcattgaaaaatgactcaccttctgag
ggtcatttgcaaactaaagtgttggaaatcaacttgttgcatgctccacaagtggctgat
gcaattttgggtaaccaaatgttcagtcactatgacaaaccaactattggtaagttatgt
gagaaatctggtttgttccaaagagctttggagcattacgatgacctcaaggatatcaag
agagttattgttcataccaatgtcttacctagtgactggctagtttcttattttggtcag
ttgaatgtcgatcaatcaatcgcatgtctcaaggagttgtttagccacaacttgcaacaa
aacttgcaagtaattatccaagttgccaccaaatattctgacttgattggtcctcaaaag
ttgattaaattatttgaggaatacaaatgtagcgaagggttgtattattatttgagctca
atcgtgaatcttacccaagactcagatgttgtgttcaaatatatccaagctgctgctaga
attggccagacaaaggaaattgaaagagttgttagagacaataatgtttacaatggtgag
aaagtgaaaaactttttgaaagaattcaaattggaagatcaattgccattggtgattgtg
tgtgacagattcaactttgtacatgatttgatcttgtacttgtacaagaaccaatacttt
aagtttattgaagtatatgtccaatcagtcaatccttcaaacactccacaagttattgct
ggtttgttagatgtagactgtgatgaagcagttattaagaacttgttgatgtcagtgctt
ggaagagtccctatcaagacattggttgaggaagttgaaaagagaaacagattaaagatt
ttgttgccatatttggaaaaaacattggagggtggctccaatgaccaagaagtttacaat
gcgttggccaagatctatatcgactccaacaactcaccagagaaattcttgcaagaaaac
aacaactacgatactttagttgttggtaagtattgtgaaaagagagacccatacttggcg
tacatttcatattcaaaaggtggcaatgatgatgagttgatcaacattactaatgaaaac
aagatgtacaaataccaagctcgttatttgttgcaaaaatcagatcttgatttgtggaac
aaagtacttggctctgataacatccacagaagacaattggtagaccaagttatctcaacc
ggtatcccagagttggacgacccagaaccaatctccattacagtcaaggcgtttatggag
aatgatttgcccgaagagttgatggagttgcttgaaaaaattattttggaaccatctgca
tttagtgaaaatgcttcattgcaaggcttgatgatcttgactgcaattaaagctgactct
tcaaaggtttccggatacattgagaagttggacaagtttgatcctcaagagattgcacct
ttgtgtatcgataatggcttaaacgaagaagcatttgaggtgtatgacaagtttgaattg
agatcagaagctatgaatgttttggttgagagcattgtttctttagacagagctgagcaa
tatgctgagaaatatgatacaccagaattgtggtatcaattgggtactgctcaattagat
ggtttaagaatccctgaagcaatcgactcatacatcaagtctaagaatcccgagaatttc
gaacaagtcattgatattgccgagcatgcaggcaaggaggaagaattacttccatacttg
gagatggctagagagacattgagagaacctgttattgatggtgctatcatcaatgcatat
gctactttggatagattaagagacatggaaagttttgttggtggatcaaacgttgctgat
ttggaaaccattggtgacaagttgtttgaagccaaaaactacaagggagccaagattttg
tattcgaatgtttctaaatattctaaattggcaactactcttgtttacttggaagattac
caaggtgcagtcgattgtgctagaaaagcatcaaacattagtgtttggaaacaggtcaat
aatgcctgtatcgagaacaaagaatttagattggctcaaatttgtggtttgaacttgatt
gtcgatgctgaggaattacccgagcttgtaaagacttatgaatacaacggttatttcaat
gagttaatttcattgtttgaaagtggtttaggtttggagagagcacatatgggtatgttt
accgaattggcgatcttgtacgccaagtatacacccgagaaagtgatggagcacttgaag
ttgttctggtcaagaatcaatatccccaaggtattgactgcgtgcgaagatgcgcacttg
tacccagagttgatatttttgtactgtcattatgaagagtgggacaatgctgcattaact
atgattgaaaaatcagaagttgcatttgaccattcttcattcaaggaaatcatcgttaaa
gctccaaacttggaaatttactataaggccatccaattctacttgaatgagaatccatcc
ttgttggttgacttgttgtctgtgttgacgccaaaattggatttgccaagagttgtgaga
atgtttatcaagagtgacaacttaccaatgattaagcctttccttatctctgttttggac
aaaaacaatagtgtcgttaactcagcataccatgatttgcttattgaagaagaagattac
aagtcactccgctcttctattgagcatgagtcaaacaatagatttaacaaattagatctt
gctgaaaggttagagaaacatgatttgatcttttttagacaaattgccgccactctttat
gccaaagagaaaaaatacaacaaggccatctctattctcaaagctgataagttgtggtcg
gacttgttgaaagttgttgccatttcgaaatcgccaaagattgctcgtgatatactcgac
tattttgttgaaactggtaaccacgaatgttttgttgctcttttgtacacctcatacgaa
tacatctctcacgactatgtgatggaagtatcatggttacacaacttgagcaatttcatt
aagccatacgagatttccatcgcttatgagaaccaaaagaagttgaatgagttgtatgtt
gatttgaaaaagagacaagatgctgaaaaaggtgacgaggagtcgagcaaaaatggacaa
gctccattgatgcttaccaacgggccaatgagtttccaaaatacaggacttctgtctgca
ccatccttgggtttccaaccaactggaacaggatttggtaacgcattttag
DBGET
integrated database retrieval system
