Lodderomyces elongisporus: PVL30_005670
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Entry
PVL30_005670 CDS
T01116
Symbol
SHM2
Name
(RefSeq) Serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lel
Lodderomyces elongisporus
Pathway
lel00260
Glycine, serine and threonine metabolism
lel00460
Cyanoamino acid metabolism
lel00630
Glyoxylate and dicarboxylate metabolism
lel00670
One carbon pool by folate
lel00680
Methane metabolism
lel01100
Metabolic pathways
lel01110
Biosynthesis of secondary metabolites
lel01200
Carbon metabolism
lel01230
Biosynthesis of amino acids
lel01240
Biosynthesis of cofactors
lel04981
Folate transport and metabolism
Module
lel_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PVL30_005670 (SHM2)
09102 Energy metabolism
00680 Methane metabolism
PVL30_005670 (SHM2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PVL30_005670 (SHM2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PVL30_005670 (SHM2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PVL30_005670 (SHM2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PVL30_005670 (SHM2)
Enzymes [BR:
lel01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PVL30_005670 (SHM2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
5231112
NCBI-ProteinID:
XP_001524122
UniProt:
A5E5P6
LinkDB
All DBs
Position
8:complement(870147..871559)
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AA seq
470 aa
AA seq
DB search
MSYALSQTHRQLTEGHLKETDPEVDQIIKDEVDRQKHSIVLIASENFTTTAVFDALGTPM
SNKYSEGYPGARYYGGNEHIDRMETLCQERALKAFHLTPDRWGVNVQTLSGSPANLQVYQ
AIMKPHERLMGLDLPHGGHLSHGYQTDSRKISAVSTYFETMPYRVDLETGLIDYDMLEKT
AVLYRPKVLVAGTSAYCRLIDYKRMREIADKVGAYLVVDMAHISGLVAAGVIPSPFEYAD
IVTTTTHKSLRGPRGAMIFFRRGVRSTNPKTGQEIYYDLENPINFSVFPGHQGGPHNHTI
AALSTALKQAATPEFKEYQEQVLKNAKALEEAFTAKGYKLVSNGTDSHMVLVSLKDKQID
GARVETVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGLGEEDFKRIVDYIDFAV
NFAKKTQESLPKDANKLKDFKNKILNESDETLEKVKSEISEWAGSFPLAV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacgcattatcacaaactcacagacaattaactgaaggtcacttgaaagagaca
gacccagaagtcgatcaaatcattaaggatgaagttgacagacaaaagcattcgattgtg
ttgattgcttctgagaatttcaccaccactgccgtatttgatgccttaggaactccaatg
tccaacaaatactctgaaggctacccaggtgcaagatactatggtggtaatgagcacatt
gacagaatggaaaccttgtgtcaagaaagagccttgaaggcatttcacttgaccccggac
cgttggggtgttaatgtgcaaacattaagtggatctccggccaacttgcaagtttaccaa
gccatcatgaaaccgcacgagagattaatgggtttggatttacctcacggtggtcacttg
agtcacggttatcaaactgattctaggaaaatcagtgctgtttcaacttattttgagacc
atgccatacagagttgatttggaaactggtttgattgactacgatatgttggaaaagact
gctgtattgtacagacccaaggttttggttgctggtaccagtgcttattgtagattgatt
gactataagagaatgagggagattgcggacaaggttggtgcttaccttgttgttgatatg
gcccacatttcaggtttggttgctgctggtgttatcccttcaccatttgaatatgccgat
attgttaccactactacacacaagtcattgaggggtccaagaggtgccatgatcttcttt
agaagaggtgtgagatccaccaacccaaagactggacaagagatttactatgatttggaa
aacccaataaacttttctgtattccccggtcatcaaggtggtccccataaccacaccatt
gctgctttgtcgactgctttgaagcaagctgctactcctgagttcaaagagtaccaagaa
caagtgttgaagaatgccaaggctttggaagaagcattcactgccaagggatacaaattg
gttagcaatggtaccgactcgcacatggttttggtttctcttaaggacaaacaaattgat
ggtgctagagtggaaactgtttgcgaaaagatcaatatcgcattgaataaaaattctatt
ccaggtgacaaatcggctttagtcccgggtggtgttagaattggtgcaccagctatgact
actagaggtttaggcgaagaggatttcaagagaattgttgactacattgactttgcagtc
aatttcgccaaaaagactcaagaatctttgcccaaggatgctaacaaattgaaggatttc
aaaaacaagattttgaacgaatcagacgagactttggaaaaggtcaaactggagattagc
gaatgggctggctctttcccattagctgtttag
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