Lodderomyces elongisporus: PVL30_005725
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Entry
PVL30_005725 CDS
T01116
Symbol
PBP2
Name
(RefSeq) PAB1 binding protein
KO
K18738
heterogeneous nuclear rnp K-like protein
Organism
lel
Lodderomyces elongisporus
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lel03019
]
PVL30_005725 (PBP2)
Messenger RNA biogenesis [BR:
lel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
PVL30_005725 (PBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
5230932
NCBI-ProteinID:
XP_001524169
UniProt:
A5E5U3
LinkDB
All DBs
Position
8:complement(1044895..1047096)
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AA seq
733 aa
AA seq
DB search
MSDVSPPNDGSNNVLKRKNEDSESIEGSINGDGIPVKQTKRVAFNPEELDLQGEEEDKKH
TAPTIGISIDSAVDSNAAANAEDTEDTANEENIGKTEAETEAEAEAQADVDVDVDVDVDA
ENEQTDQGDEATDIVKDESEPVSSSEGGKNEDIEDNESKEQSKEQSSSDSVSKNEEEDSK
DTNTSTSEKPAFGQAQTVQQILQQAALLSDLAPTPASAPEQKSSASGASDNSGASGNSGD
SGLSGHSGESDVPNVPNVPNVPSAPKDFKHPRDSRDSRDSRGSRDFRDSRDSFGSVASAQ
LPAAPTRASGSNSDYRSSSSSSKPFHVEDDASFISVRIICPVKEASTIVGKQGSKINHLR
EKANVRIQVSENIRDVPERIVTVRGTPENIARAYGLIVRTILSEPEDEPANINSQQYTLK
LLIPHALIGFLIGKQGSKFREIEENSAAKLKAAEQPLPYSTDRVLSVSGVGDAIHIAVYY
LSLLLNDHQDVLKKHKVILYNPANYRPEGGHANDSHQHQRPPRYHQQPPSGSSQYGMNPM
FQNRFDQYQRPPPPHQQHQQQQQSSSHQPQSSQSPYDFSSMFQPAVQPQQPYGGLPPQQA
PPAAAAAIPGAMSSGGGMNPQPYTDEFNNTLIGEVIIHPPSSAGDKYNQDVYVANSSIGS
VIGRGGNNIKHIRENSGCTYVRIEPDKGQSIMLGGRGLTNIRRLTLTGSLESFDKAIYLI
NQRINADRERNSR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgtttcgccacccaatgatggttctaataacgttttaaaacgtaaaaacgaa
gattctgaaagtatcgagggttcgatcaatggtgatggtattcctgtgaaacagacgaaa
agagtagctttcaatcctgaagaactcgatttgcaaggtgaagaagaagacaagaaacat
actgcgccaactattggaattctgattgactctgctgtagactcaaatgctgcagcaaat
gcagaagatacggaagatacagcaaatgaagaaaatattggtaaaaccgaagccgaaacc
gaagctgaagccgaagcccaagctgatgttgatgttgatgttgatgttgatgttgatgct
gagaacgagcaaactgatcaaggcgacgaggcaacggatattgtcaaggatgaatcagaa
ccggtttcttcctctgaaggtggaaaaaatgaggacattgaagacaatgaatctaaagaa
caatctaaagaacaatctagctctgattctgtctctaagaacgaggaagaggattcgaaa
gataccaatacttctacatctgagaagcctgcatttggccaggctcaaactgtacaacaa
atcttgcaacaagctgccttattgtctgatctcgccccaacccctgcttctgctcctgaa
cagaaaagttctgcctccggtgcctctgataactctggtgcatctggtaactctggtgac
tctggtctttctggccattctggcgaatctgatgttcctaatgttccaaatgttcctaat
gtcccaagtgctcctaaagattttaaacaccctagagattctagagactctagagattca
agaggttcaagagactttagagactccagagactcatttggctcagtagcttctgctcaa
cttccggctgcacctacgcgtgcgtcgggatcaaattctgattatagatcgctgtcctct
tcgtcaaaaccttttcatgttgaagatgacgcctcattcatttctgttaggataatctgt
cctgttaaagaggccagcacaattgttggaaaacaaggaagcaaaataaaccatcttaga
gaaaaggcgaatgtgcgtattcaagttagtgaaaacattcgcgatgttccagaacgtatt
gttactgttaggggtacacctgaaaacattgcaagagcttacggcttaattgtaagaacg
attttaagcgaacctgaagatgaaccagccaacataaatagtcaacaatacactttaaag
ctactcattccacatgctttaattggatttttgattggtaaacaaggttccaagtttcgt
gaaattgaagaaaactccgctgcaaaattgaaagctgccgaacaaccattgccatattct
acggacagagtcttgagtgttagtggtgtgggtgatgcaatccacattgcagtatactac
ctttcgttgctattaaacgatcatcaggatgtattaaaaaaacacaaggttatattgtac
aatccagctaattacagaccagaaggtggccatgcaaatgacctgcaccaacaccaacgt
cctccacgttaccatcagcaacctccatcgggactgtcacagtatggcatgaaccctatg
ttccaaaacaggtttgatcaatatcagagaccaccaccaccgcatcaacaacatcaacaa
cagcagcagctgctgctgcaccagcctcaactgctgcaactgccatatgatttttcttcg
atgttccagccagcagttcaacctcaacagccttatggtggattgcctccgcaacaagca
cctccagcagctgcagccgcaattcctggcgctatgtcatctggaggtggaatgaatcca
cagccctacactgacgaattcaacaacaccctcattggagaagtgatcatccatcctccg
ctgctggcaggtgacaagtacaatcaggatgtttatgttgccaactctctgattggttct
gttataggaagaggtggtaataatatcaaacacattcgtgaaaacagtggatgtacatac
gttagaattgaacctgataagggccaatccatcatgttgggaggaagaggcttgacaaat
atcagaagactcactttgactggtagtttggaatcctttgacaaggcaatctatttgatc
aatcaaagaatcaacgctgatagagagagaaactctagataa
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