Lysobacter enzymogenes M497-1: LEN_1377
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Entry
LEN_1377 CDS
T04598
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lem
Lysobacter enzymogenes M497-1
Pathway
lem03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lem00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LEN_1377 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lem03021
]
LEN_1377 (rpoA)
03400 DNA repair and recombination proteins [BR:
lem03400
]
LEN_1377 (rpoA)
Enzymes [BR:
lem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LEN_1377 (rpoA)
Transcription machinery [BR:
lem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LEN_1377 (rpoA)
DNA repair and recombination proteins [BR:
lem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LEN_1377 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
BAV96864
UniProt:
A0ACG3UQE4
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All DBs
Position
1570350..1571348
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AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERLNGNRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLEEDVLEVLLNLKDVAIRMHTGESSTLSLAKQGPGIVTAGDIKTDHN
VEILNTDHVICHLTKDTAINMRLKIERGFGYQPAASRRRPDEETRAIGRLMLDASFSPVR
RVAYAVEAARVEQRTDLDKLVLDIETNGTIDAEEAVRTAADILTDQLSVFGDFTHRDRGA
QKPATSGIDPILLRPIDDLELTVRSANCLKAESIYYVGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLSLGMKLENWPPAGIASHGMMG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaaccaggtactgcgcccgcgtggcccgcagatcgaacgcctcaac
ggcaatcgcgccaaagtcgtgatcgagccgttggagcgcggttacggccacacgctgggc
aacgcgttgcgccgcgtgctgctgtcgtcgatcccgggtttcgccatcaccgaggtcgaa
atcgacggcgtgcttcacgagtacaccacggtcgaaggtctggaagaggacgtgctggaa
gtcctgctgaacctgaaggacgtggccatccgcatgcacaccggcgagtcctcgacgctg
tcgctggccaagcagggccccggcatcgtcaccgccggcgacatcaagaccgaccacaac
gtcgaaatcctcaacaccgaccatgtgatctgccacctgaccaaggatacggcgatcaac
atgcgtctgaagatcgagcgcggcttcggctaccagccggcggcctcgcgccgtcgtccg
gacgaagaaacccgcgccatcggccgcctgatgctggacgccagcttctcgccggtgcgc
cgcgtcgcctacgccgtggaagccgcgcgcgtcgagcagcgcaccgacctggacaagctg
gtcctggacatcgagaccaacggcacgatcgacgccgaggaagccgtgcgcaccgccgcc
gacatcctcaccgatcagctgtcggtgttcggcgacttcacccaccgcgaccgcggcgcg
cagaagccggccaccagcggcatcgatccgatcctgctgcgcccgatcgacgatctggag
ctgacggtgcgttcggccaactgcctcaaggccgagagcatctactacgtcggcgacctg
atccagaagaccgaggtcgagctgctgaagaccccgaacctgggcaagaagtcgctcacc
gagatcaaggaagtgctggctcagcgcggcctttcgctcggcatgaagctcgaaaactgg
ccgccggccgggatcgcttcgcatgggatgatgggctga
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