Lysobacter enzymogenes M497-1: LEN_1727
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Entry
LEN_1727 CDS
T04598
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lem
Lysobacter enzymogenes M497-1
Pathway
lem03030
DNA replication
lem03430
Mismatch repair
lem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LEN_1727 (dnaE)
03430 Mismatch repair
LEN_1727 (dnaE)
03440 Homologous recombination
LEN_1727 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lem03032
]
LEN_1727 (dnaE)
03400 DNA repair and recombination proteins [BR:
lem03400
]
LEN_1727 (dnaE)
Enzymes [BR:
lem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LEN_1727 (dnaE)
DNA replication proteins [BR:
lem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LEN_1727 (dnaE)
DNA repair and recombination proteins [BR:
lem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LEN_1727 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BAV97214
UniProt:
A0AAU9AF23
LinkDB
All DBs
Position
complement(2028028..2031561)
Genome browser
AA seq
1177 aa
AA seq
DB search
MSAPFVHLHLHSEYSLADSTLRIGELVKRCVALGQPAVALTDLDNIFAAVKFYKACEGAG
IKPIIGADVHLADGNESASRLTLLCRDRGGYLSLSRLLSRAWMEGHRTEGVVLRPEWLRE
DNDGLFALAGRNSLAARLAASNREELAHAWLVDWQGVFGDRLHLELTRTQRDGEDAFNAF
ALQAASKRGLPVVASNDARFLDRDGFEAHEARVCIASGRVLDDPKRPRDYSEEQYLKTGE
EMAALFADVPDAFDNALALATRCNVELKLGEYALPAFPTPSDHTIESWLRSQSREGLAKR
LEKNPLAPGKTREEYEQRLEIELDVIIKMGFPGYFLIVADFINWAKDHEIPVGPGRGSGA
GSLVAWALGITDLDPLPYDLLFERFLNPERVSMPDFDIDFCMDRRDEVIDYVARKYGRDR
VSQIITYGTMAAKAVVRDAGRVLGHPYGFVDGIAKLIPMTLGISLDDALGESEAAAKNPE
LASADLIQRYRNEDDVRDLLDLARSLEDLTRNAGKHAGGVVIAPSPLSDFCPLFAEHDGE
GRGRNPVTQFDKDDVEAVGLVKFDFLGLRTLTIIDWAVRAINKRRAKEGQDPLDINALEL
TDKPTYELFARGDTVAVFQFESRGMRELLKRAKPDTFEDIIALAALFRPGPLGSGMDKDW
VDRKHGNAEVTYPHDSLEPVLAPTYGVIVYQEQVMQIAQVLAGYTLGGADMLRRAMGKKK
PEEMAKERAKFEAGCAERNIPAKQASPIFDLMEKFAEYGFNKSHSAAYALVAYQTGWLKR
HYGAEFMAATCSSDMDNTDKVVNFLDEARVMGITVLPPHVNESEYMFEAIDASTIRYGIG
AVKGVGRGVCESIVEARRAGPFADLLDFCKRVDSGKLNRRALEALTHAGALDGLGKNRAS
LMLQLPEVLKATDQMAKERAAGQVSLFGGFEAAAPALHLDLSETNEWPLAQILHGERETL
GHYLSGHPFDPYREELRSLVGTDLGELEGIWEKRPESARSGWRPELEVIVAGQVVGLRKK
GDSQMFVQIEDGRGRLECAFFSETYSEFASMLARDRLLVIQGGLREDAFSGGFALRAARC
WDYNAVCAKHAQRLALRLDLRVPGAWQRVDALLAKQRPGPTPIRLDLLRDGAAGMLDLNG
PQSVRIDAELTGLLRAQPGVKAVKLTLSKPWARSGGD
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctcctttcgttcatctccacctgcacagcgagtactcgctggccgactcgacc
ctccgcatcggcgagctggtcaagcgttgcgtcgccctcggccagccggccgtggccctg
accgacctcgacaacatcttcgccgcggtcaagttctacaaagcctgcgaaggcgccggc
atcaagccgatcatcggcgccgacgtgcatctggccgacggcaacgaatcggcctcgcgc
ctgaccctgctgtgccgcgaccgcggcggctacctgagcctgtcgcgcctgctcagccgc
gcctggatggaaggccaccgcaccgaaggcgtggtgctgcgcccggaatggctgcgcgag
gacaacgacggcctgttcgcgctcgctggccgcaacagcctggccgcgcgtctggccgcg
agcaaccgcgaagagctcgcccacgcctggctggtcgactggcagggcgtgttcggcgac
cgcctgcacctggaactgacccgcacccagcgcgacggcgaagacgcgttcaacgccttc
gccctgcaggccgcgagcaagcgcggcctgccggtggtggccagcaacgacgcgcgcttc
ctcgaccgcgacggcttcgaagcgcacgaagcgcgcgtgtgcatcgcctcgggccgcgtg
ctcgacgaccctaagcgcccgcgcgactacagcgaagagcaatacctcaagaccggcgag
gaaatggccgcgctgttcgccgacgtgcccgacgcgttcgacaacgcgctggccctggcc
acgcgctgcaacgtcgagctcaagctgggcgaatacgcgctgccggcgtttcccacgccg
agcgaccacaccatcgaatcgtggctgcgcagccagtcgcgcgaaggcctggccaagcgc
ctggagaagaacccgctcgcgcccggcaagacccgagaggagtacgagcagcgcctggaa
atcgagctggacgtcatcatcaagatgggcttccccggctacttcctgatcgtggcggac
ttcatcaactgggccaaggatcatgagatcccggtcggcccgggccgcggttccggcgcc
ggctcgctggtggcctgggcgctgggcatcaccgacctggacccgctgccctacgacctg
ctgttcgagcgcttcctgaaccccgaacgcgtgtcgatgcccgacttcgacatcgacttc
tgcatggaccgccgcgacgaggtcatcgactacgtcgcgcgcaagtacggccgcgaccgc
gtctcgcagatcatcacctacggcaccatggcggccaaggcggtggtgcgcgacgcaggc
cgcgtgctcggccatccgtacggcttcgtcgacggcatcgccaagctgatcccgatgacc
ctgggcatctcgctcgacgacgcgctgggcgaatccgaagcggcggcgaagaatccggaa
ctggcctcggccgacctgatccagcgctaccgcaacgaagacgacgtgcgcgacctgctg
gatctggcgcgcagcctggaagacctgacccgcaacgccggcaagcacgccggcggcgtg
gtgatcgcaccgagcccgctgtcggacttctgcccgctgttcgccgaacacgacggcgaa
ggccgcggccgcaacccggtgacccagttcgacaaggacgacgtcgaagccgtcggcctg
gtcaagttcgacttcctcggcctgcgcacgctgacgatcatcgattgggcggtgcgcgcg
atcaacaagcgccgcgccaaggaaggacaagacccgctcgacatcaacgcgctggagctg
accgacaagcccacctacgagctgttcgcgcgcggcgacaccgtcgcggtgttccagttc
gaatcgcgcggcatgcgcgagctgctcaagcgcgccaagcccgacaccttcgaagacatc
atcgcgctggccgcattgttccgtcccggcccgctgggctcggggatggacaaggactgg
gtcgaccgcaagcacggcaacgccgaggtcacctatccgcacgattcgctggagccggtg
ctggcgccgacctacggcgtcatcgtctaccaggaacaggtgatgcagatcgcccaggtc
ctggccggctacaccctcggcggcgccgacatgctgcgccgcgcgatgggcaagaagaag
ccggaggaaatggcgaaggagcgcgccaagttcgaggccggctgcgccgagcgcaacatc
ccggccaagcaggccagcccgatcttcgacctgatggagaagttcgccgagtacggcttc
aacaagtcgcactcggccgcgtacgcgctggtcgcgtaccagaccggctggctcaagcgc
cactacggcgccgagttcatggccgcgacctgctcgtcggacatggacaacaccgacaag
gtggtcaacttcctcgacgaagcgcgggtgatgggcatcaccgtgctgccgccgcacgtc
aacgaatcggagtacatgttcgaggcgatcgacgccagcaccatccgctacggcatcggc
gcggtgaagggcgtcggccgcggcgtgtgcgagtcgatcgtggaagcgcgccgcgccggc
ccgttcgccgacctgctcgacttctgcaagcgcgtggacagcggcaagctcaaccgccgc
gcgctggaagcgctgacccacgccggcgcgctcgacggcctgggcaagaaccgcgcgagc
ctgatgctgcaactgcccgaagtgctcaaggctaccgaccagatggccaaggagcgcgcc
gcgggccaggtctcgctgttcggcggcttcgaagccgccgcgccggcgctgcacctggac
ctgagcgaaaccaacgagtggccgctggcgcagatcctgcacggcgagcgcgaaaccctc
ggccactacctcagcggccatcccttcgatccgtatcgcgaagagctgcgctcgctggtc
ggcaccgacctgggcgagctcgaaggcatctgggaaaaacgcccggaaagcgcgcgcagc
ggttggcgcccggagctggaagtgatcgtggccgggcaagtggtcggcctgcgcaagaag
ggcgacagccagatgttcgtgcagatcgaggacggccgcggccgcctggagtgcgcgttc
ttctccgagacctacagcgagttcgcctcgatgctggcgcgcgaccgcctgctggtgatc
cagggcggcctgcgcgaggacgccttcagcggcggcttcgccctgcgcgcggcgcgctgc
tgggactacaacgcggtctgcgccaagcacgcccagcgcctggccctgcgcctggacctg
cgcgtgcccggcgcctggcaacgcgtcgacgccctgctggccaagcagcgccccggcccg
accccgatccgcctggacctgttgcgcgacggcgcggccggcatgctcgacctcaacggc
ccgcaatcggtacgcatcgacgccgaactgaccggcctgctgcgcgcccagccaggcgtg
aaggcggtcaagctgaccctgtccaagccgtgggcgcgctccggcggcgattga
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