Lysobacter enzymogenes M497-1: LEN_2805
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Entry
LEN_2805 CDS
T04598
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lem
Lysobacter enzymogenes M497-1
Pathway
lem03410
Base excision repair
lem03430
Mismatch repair
lem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LEN_2805 (recJ)
03430 Mismatch repair
LEN_2805 (recJ)
03440 Homologous recombination
LEN_2805 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lem03400
]
LEN_2805 (recJ)
DNA repair and recombination proteins [BR:
lem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LEN_2805 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LEN_2805 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LEN_2805 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
BAV98292
UniProt:
A0AAU9AV98
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All DBs
Position
complement(3549936..3551657)
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AA seq
573 aa
AA seq
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MKPAARLRRREPAADGQWPDSIPPLLQRIYAARGATCIEQAQPKLAQLLPPDGMLGLDRA
TELLAAAIADDRHILVVGDFDCDGATACAVGVRGLRMLGAKRVSHAVPNRIVHGYGLSPA
LVDELARLQPDLLVTVDHGIACHAGIDAARARGWQVLVTDHHLPGETLPPADAIVDPNQP
GDAFPSKMLAGVGVMFYVLLALRRRLREAGAFGAGHNGPDLSQLLDLVAVGTVADLVPLD
ANNRALVAAGLRRLRAGQGGAGLRALIEVAQRDYRRLTAADIGYALAPRLNAAGRLEDMA
LGIECLLTENPAQAREIASTLNDINAERRAVQQQMTDEAERAFARVAFDPAAAPLAPCLF
DPDWHPGVVGLVASKMKERLHRPVIAFAPAEPGSAQLRGSARSIPGFHIRDALADVASRH
PELIERFGGHAMAAGLSLHRDAFEPFRDAFDAVARAALTPELLQADVLSDGALAPAEFDR
RHAESLRDGGPWGQGFAEPQFDGEFEVLSWRVIGERHLKLELGCEGRRLNAIEFGGWDGN
KPPLWVRIAYRLEPDDYRGGEAVQLIVVHREAL
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcccgccgcgcgcctgcgccggcgcgagccggcggccgacgggcagtggcccgac
tcgatcccgccgttgctgcagcgcatctacgccgcgcgcggcgcgacctgcatcgaacag
gcccagcccaagctcgcccaactgctgccgcccgacggcatgctcggcctggaccgggcc
accgagctgctggccgcggccatcgccgacgaccgccacatcctggtggtcggcgatttc
gattgcgacggcgccaccgcctgcgcggtcggcgtgcgcggcctgcgcatgctcggcgcg
aagcgggtctcgcacgcggtgcccaaccgcatcgtgcacggctacggtttgtcgccggcg
ctggtggacgaattggcgcggctgcaaccggatctgctcgtcaccgtcgaccacggcatc
gcctgtcacgccggcatcgatgcggcgcgcgcgcgcggctggcaggtgctggtgaccgat
caccatctgcccggcgaaacgctgccgccggccgacgccatcgtcgacccgaaccagccc
ggcgacgcgttcccgagcaagatgctggccggcgtcggggtgatgttctacgtgctgctg
gcattgcgccggcgcttgcgcgaagccggcgcgttcggcgccggccacaacggccccgac
ctcagccaactgctcgatctggtcgcggtcggcaccgtcgccgacctggttccgctcgac
gccaacaaccgcgcgctggtcgccgccggcctgcgccggctgcgtgcagggcagggcggc
gccggcctgcgcgcgctgatcgaagtcgcgcagcgcgattaccgccgcctcaccgcggcc
gatatcggctacgcgttggcgccgcggctcaacgccgccgggcgcctggaagacatggcg
ctgggcatcgaatgccttctgaccgaaaacccggcgcaagcgcgcgagatcgcatccacg
ctcaacgacatcaacgccgaacgccgcgcggtacagcagcagatgaccgacgaggccgag
cgtgcgttcgcgcgcgtggcgttcgatccggccgcagcgccgctcgcgccgtgtctgttc
gatccggactggcatcccggcgtggtcgggctggtcgcctcgaagatgaaagagcgcctg
catcgcccggtgatcgcgttcgcgccggccgagcccggcagcgcgcagctgcgcggctcg
gcgcgttcgattcccggcttccatatccgcgacgcgttggccgacgtggcctcgcgccat
cccgagttgatcgaacgcttcggcggccacgccatggccgcgggcctgtcgctgcaccgc
gacgcgttcgaaccgttccgcgacgccttcgacgcggtcgcgcgcgcggcgctgacgccg
gaactgctgcaggccgacgtgctcagcgacggcgcgctggcgccggccgagttcgaccgc
cgccacgccgagtcgctgcgcgacggcgggccgtgggggcagggcttcgccgagccgcag
ttcgacggcgagttcgaagtgctgtcgtggcgggtgatcggcgagcgccacctcaagctg
gagctgggttgcgaagggcgccggctgaacgccatcgaattcggcggctgggacggcaac
aagccgccgctgtgggtgcgcatcgcctatcggctggagccggacgattatcgaggcggc
gaagcggtgcagctgatcgtggtgcatcgcgaggcgttgtaa
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