KEGG   Lysobacter enzymogenes M497-1: LEN_3923
Entry
LEN_3923          CDS       T04598                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
lem  Lysobacter enzymogenes M497-1
Brite
KEGG Orthology (KO) [BR:lem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lem03400]
    LEN_3923 (helD)
Enzymes [BR:lem01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     LEN_3923 (helD)
DNA repair and recombination proteins [BR:lem03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    LEN_3923 (helD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 zf-C4_Topoisom AAA_30 Helicase_IV_N AAA_12 ResIII DEAD PaREP1
Other DBs
NCBI-ProteinID: BAV99410
UniProt: A0A1J1EAW7
LinkDB
Position
4848424..4851201
AA seq 925 aa
MAQDMEWGPSIWGQRFTGSGSWTLRLRGDLVELTVGRDLHTTRIAGANPLRIRQGVFWTD
LTLFPDTLDTVTVDGIPNRHGQAIADAIQAVVAEQKREAARRAEEERKLSRRLRFDAAYA
LIHDWHKSVHNSFAKAHTHKRWITQEQVRALLGARPAVPPSPEELTDLFADADIRGALGG
QLEEAERALRTWRVDLFAMANGINERHAQRELVESQDLFQRVESRPLTEEQSRAVICFDN
RVQVVASAGSGKTSTMVAKAAYAIQRLGMAPERIVMLAFNTTAARELEERAKKSFASVGI
NAAITAKTFHSLGLEIAGQATGKKAYVPSWVGNEREKQLKMSDIVDRLKSTSAKFRTEWD
MFRLVFGHSIPAFGGEQPKPDWDDKGNTGLRTLRGELVKSVDECTIANWLFYNGVDYHYE
HDYEFDTRTATHGQYHPDFYYPSVGLYHEHFALNKNGQPPPDFGRYMDGVHWKRNEHRRQ
GTDFIETTSHQLWTGKLFEHLKRALVDRGIKLDPNPDRPASDRGRVPLQHEDLIDLMSSF
ITHAKSNDLNEAALDSRLRKMPQDAFQIRNRIFLRLAKKVQQEWDAELATAKGIDFEDML
NQAATHLEQGTLASPYDLVLADEFQDASWARARLCLALVREPGRFLFAVGDDWQSINRFA
GADVSVMTGFEQWCGQGVVLRLQQTFRCPQALCDVSSHFVSKNPAQIPKNVSSETSAHGP
VLHAFQVAGKDQIQDAVLGFLKGLCEQVRAGTTPRGRDGKLSVFVLGRYNDDQRRYVPSN
WTQACGDVLTVQFMTMHASKGSEADYVILPSMVWGGFPSLRQDDPVLALAMPGCDTYPFA
EERRLFYVALTRARRAVAMFTVRGHQSPFLTELVEDKLVVVTDTTGTPVKDRMCPKCKRG
VIERKTGRYGVFYGCSAFPKCRYKP
NT seq 2778 nt   +upstreamnt  +downstreamnt
atggcgcaggacatggaatggggcccttcgatctgggggcagcggttcacgggctcgggc
agttggacgctgcgtctccgaggcgatttggtggaactcaccgtgggccgagacctgcac
accacccgcattgcgggcgcgaacccattgcggatccgccaaggggtgttctggaccgat
ctcacgctctttccagacaccttggacacggtcacggttgatggcattcccaaccggcac
gggcaggcgattgcggacgccatccaagcggtggtggccgagcaaaagagagaggcggcg
cggcgtgcggaagaagagcgcaagctcagccggcgcctacggttcgatgcggcctacgca
ctcatccatgactggcataagagcgtccacaactcctttgcgaaagcccacacacacaag
cggtggatcacccaagaacaggtccgcgcgctgcttggcgctcggcccgcggtcccgccc
tcgcctgaggagctgacagaccttttcgcggatgcagacatccgtggtgcccttggtggt
caattggaagaggccgagcgcgcattgcgaacatggcgcgtcgatctctttgcaatggcc
aacgggatcaatgagcggcacgcacagcgtgagctcgtggagagtcaagacctgtttcag
cgggtcgagagccggccgctcaccgaagaacagtcccgggctgtgatttgctttgacaac
cgcgtgcaggtggtggcctctgccggctcaggcaagacctccacgatggtggccaaagct
gcgtatgccatccaacgccttggcatggcgccagagcgcatcgtcatgttggccttcaac
accacagcagcgcgggagcttgaagagcgggcgaaaaagtcattcgcctctgtcggcatc
aatgccgccatcaccgccaagacattccattcattgggcttggagatcgcgggacaggcc
acgggcaagaaggcctacgtgcccagctgggtgggcaacgagcgcgaaaagcagctcaag
atgtcggacattgtcgatcgcctaaagagcacgtcggccaagttccgcaccgagtgggac
atgttccgactggtgttcgggcacagcattcctgcgtttgggggcgagcaacccaagccc
gactgggacgacaagggaaatacgggcctgcgcacactgcgcggagagctggtcaaaagt
gtcgacgagtgcaccatcgccaattggctgttctacaacggtgtcgactaccactacgag
catgattacgaattcgacacccgaacggccacgcatgggcagtatcacccagacttctac
tacccaagcgtcggcctctaccacgagcactttgccctgaacaaaaacgggcagccaccg
ccggactttggccgctacatggacggcgtgcattggaagcgcaacgaacaccgcaggcaa
ggcaccgacttcatcgaaaccacgtcgcatcagttgtggaccggcaaactcttcgagcac
ctcaaacgcgcactggtggaccgcgggatcaagctcgatcccaatccagaccgaccggcc
agcgatcgtggccgcgtgccgctgcagcacgaagatctgatcgatctcatgtccagcttc
atcacgcacgccaaaagcaatgacctgaatgaggcggcgttggattcgcgcctgcgcaag
atgccccaagacgctttccagatccgcaaccggatctttctgcggcttgccaagaaggtg
cagcaggagtgggatgcggagcttgccaccgccaaaggcatcgactttgaggacatgctc
aatcaggcggcaacacatttggagcaaggcacactggcttcgccttacgacttggtgttg
gccgatgagttccaagacgcctcgtgggcacgcgcgcgtctgtgcttggcgttggtgcgc
gaaccggggcggtttttgtttgccgtgggggatgactggcaatcgatcaaccgctttgcc
ggcgcggacgtctctgtgatgaccggctttgagcagtggtgtgggcaaggggtcgtgctg
cggctgcagcagaccttccgctgcccgcaggccttgtgcgacgtgtccagccacttcgtg
tccaagaaccccgcccagataccgaagaacgtctcctccgagacatctgctcatggccca
gttctgcacgcctttcaggtggcgggcaaagaccagatccaagacgcggtcttgggcttt
ctcaagggcctctgtgaacaagtgcgtgctggcaccacgccacgcgggcgcgacgggaag
ctttcggtgttcgtgctggggcgttacaacgacgaccaacgcaggtatgtgccgagcaac
tggacgcaggcatgcggagacgtgctcaccgttcagttcatgacgatgcatgcctcaaaa
ggcagcgaggccgactacgtcattttgcccagcatggtttggggcgggtttcccagcctg
cggcaggacgatccggtgttggcactggccatgcccgggtgcgacacctatccgttcgca
gaagagcggagattattctacgtggccctaacacgtgcgcggcgagccgttgccatgttc
accgtccgcggccaccagtcgccattcctcacagaactggtggaagacaagctcgtggtc
gtgacagacaccacaggcaccccggtgaaagatcggatgtgcccgaagtgcaaacgcggc
gtgatcgagagaaaaacgggccgatacggggtcttttacggctgctccgccttccccaag
tgccgatacaagccgtga

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