Lysobacter enzymogenes M497-1: LEN_3938
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Entry
LEN_3938 CDS
T04598
Name
(GenBank) conserved hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lem
Lysobacter enzymogenes M497-1
Pathway
lem03420
Nucleotide excision repair
lem03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LEN_3938
03430 Mismatch repair
LEN_3938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lem03400
]
LEN_3938
Enzymes [BR:
lem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LEN_3938
DNA repair and recombination proteins [BR:
lem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LEN_3938
MMR (mismatch excision repair)
Other MMR factors
LEN_3938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
BAV99425
UniProt:
A0AAU9AY36
LinkDB
All DBs
Position
complement(4869845..4870912)
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AA seq
355 aa
AA seq
DB search
MAKHLTLAVAGSRKTQGLVEHCAALPKERRVLVLTYTGLNQHELRQRLSNYAGGHLNIEV
LGWFSFLLRDFARPFLRYKFVDKRVNGFIFEGGPNRMAVGAARFLSKSDAVYRAELGRLA
FELIGETGGALIRRLEGVYDEILIDEVQDLSGYDWEILDALLESDIEIRMVGDIRQSVLS
TYPRGTKNRKYAYAEAIKWFRKHETAGRLTIAESVETWRCHQTIATFSDSIFDRSWGFPA
TKSLNERATGHDGVFLVRSEHVQTYVAQFQPQCLRYNANCGKAFTLDYMNFRVAKGATFE
RVLIVPTVKIKKFVLEDKELEPLLAAEFYVAVTRAAQSVAIVIDGAKDVSLPRWS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacacctgacactcgctgttgccggctcgcggaaaacgcaagggttggtcgag
cactgtgcggcgttgccgaaagagcgcagggtgttggtgttgacctacacgggacttaat
cagcacgagcttcgccagcgcctatccaactatgccggtgggcatctcaacattgaagtg
cttggctggttttcgtttttgctgcgcgacttcgcacgtccatttctccgctacaagttc
gtcgacaagcgggtgaatggcttcatctttgaaggcggaccgaatcggatggcagttggc
gctgcccgtttcttaagcaaaagcgatgctgtctaccgcgcagagttggggcggctggca
tttgagctgattggcgagacaggcggggctttgatccggcggcttgagggtgtttacgac
gaaatcttgattgatgaggtgcaggatctcagtggatacgactgggagatcctagatgca
ctgcttgagtccgacatcgaaattcgcatggttggggatattcggcagtccgtgctgtcc
acctatccgagaggcacgaagaacagaaaatacgcgtatgcagaggccatcaaatggttt
cggaagcatgaaactgcggggcggctgaccattgcggagagtgttgagacgtggcgctgc
caccaaaccattgccacgttttctgattcgatttttgacagatcgtggggctttcccgca
acgaaatcattgaacgaaagagccacgggacacgacggggtgttcctcgttcgctctgag
catgtgcagacgtatgttgcgcagttccagccgcagtgtcttcgctacaacgcgaactgt
gggaaggcgttcacgctcgactacatgaatttccgcgtagccaagggtgcaacttttgag
cgggttttgattgtgcccactgtaaaaatcaagaaatttgtattggaagataaggagttg
gaaccgctattggccgctgaattttacgttgcagtgacccgcgccgctcagagcgttgcg
atcgtcattgatggcgctaaggatgtttcgcttcctcgctggtcgtga
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