KEGG   Lysobacter enzymogenes M497-1: LEN_4268
Entry
LEN_4268          CDS       T04598                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
lem  Lysobacter enzymogenes M497-1
Pathway
lem00010  Glycolysis / Gluconeogenesis
lem00020  Citrate cycle (TCA cycle)
lem00260  Glycine, serine and threonine metabolism
lem00280  Valine, leucine and isoleucine degradation
lem00310  Lysine degradation
lem00380  Tryptophan metabolism
lem00620  Pyruvate metabolism
lem00630  Glyoxylate and dicarboxylate metabolism
lem00640  Propanoate metabolism
lem00670  One carbon pool by folate
lem00785  Lipoic acid metabolism
lem01100  Metabolic pathways
lem01110  Biosynthesis of secondary metabolites
lem01120  Microbial metabolism in diverse environments
lem01200  Carbon metabolism
lem01210  2-Oxocarboxylic acid metabolism
lem01240  Biosynthesis of cofactors
Module
lem_M00009  Citrate cycle (TCA cycle, Krebs cycle)
lem_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lem_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
lem_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
lem_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:lem00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    LEN_4268 (lpdA)
   00020 Citrate cycle (TCA cycle)
    LEN_4268 (lpdA)
   00620 Pyruvate metabolism
    LEN_4268 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    LEN_4268 (lpdA)
   00640 Propanoate metabolism
    LEN_4268 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LEN_4268 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    LEN_4268 (lpdA)
   00310 Lysine degradation
    LEN_4268 (lpdA)
   00380 Tryptophan metabolism
    LEN_4268 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    LEN_4268 (lpdA)
   00670 One carbon pool by folate
    LEN_4268 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lem04147]
    LEN_4268 (lpdA)
Enzymes [BR:lem01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     LEN_4268 (lpdA)
Exosome [BR:lem04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   LEN_4268 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox Pyr_redox_3 FAD_oxidored Biotin_lipoyl_2 NAD_binding_8 GIDA FAD_binding_2 HI0933_like AlaDh_PNT_C GCV_H Peptidase_M23 RnfC_N FAD_binding_3 3HCDH_N DUF478
Other DBs
NCBI-ProteinID: BAV99755
UniProt: A0AAU9B074
LinkDB
Position
complement(5339391..5341226)
AA seq 611 aa
MANSIEVKVPDIGDYDDVPVIELLVAVGDTVKKDQGLVTLESDKATMEVPSSADGVVKSI
SVKVGDKVSQGAVIAILEAEGAAAGASDAKAPLPPAGEVAAAGAPPSQPSPASGGRSESA
ASSAPAPTAAAASGRKADVECRMLVLGSGPGGYTAAFRAADLGLDTVLVERYASLGGVCL
NVGCIPSKALLHAAAVIDEAEHASDYGVSFAKPTIDLDALRKYKEKVVGQLTKGLAGMAK
QRKVRTVVGTGSFVSPNELEVKGENGTQLIRFEQCIIAAGSQAVKLGNFPWDDKRVMDST
DALELADVPKKLLVVGGGIIGLEMATVYRALGSEVTVVEFLDQLMPGADADLVKPLADRL
KKQGVAVHLKTKAAATQALKDGIKVSFESAEAGKTPALESGVYDRVLVAVGRAPNGAKIG
ADKAGVQVSERGFIPVDRQMRTNVAHIFAIGDLVGNPMLAHKATHEGKLAAEVAAGEKKE
WVARVIPSVAYTDPEIAWVGVTETEAKAKGLKVGVGKFPWAASGRAIGIGRTEGFTKLIF
DEATHRIVGGGIVGVHAGDLISEVALAIEMGCEVADIGHTIHPHPTLSESVGMAAEVFDG
TITDLYIPKKK
NT seq 1836 nt   +upstreamnt  +downstreamnt
atggccaacagcatcgaagtgaaggttcccgacatcggcgactacgacgacgtaccggtc
atcgagttgctggtcgcggtcggcgacacggtcaagaaggaccagggcctggtcacgctc
gaatcggacaaggcgacgatggaagtgccgtcctcggccgacggcgtggtcaagtcgatc
agcgtcaaggtcggcgacaaggtctcgcagggcgcggtgatcgcgatcctcgaagccgag
ggcgctgccgccggtgcgagcgacgccaaagcacctctcccgcctgcgggagaggtcgcc
gccgccggtgcgcccccatcccagccttcccccgcaagcgggggaaggagcgaatccgca
gcatcgtcggcgcccgcgccgaccgccgccgccgccagcggccgcaaggccgacgtcgaa
tgccgcatgctcgtgctcggctccggccccggcggctacaccgccgcgttccgcgccgcc
gatctcggcctggacacggtgctggtcgagcgctacgccagtctcggcggcgtctgcctc
aacgtcggctgcatcccgtccaaggcgctgctgcacgccgccgcggtcatcgacgaggcc
gagcacgccagcgactacggcgtcagcttcgccaagccgacgatcgacctcgacgcgctg
cgcaagtacaaggaaaaagtcgtcggccagctgaccaagggcctggccggcatggccaag
cagcgcaaggtgcgcaccgtggtcggcaccggcagcttcgtatcgccgaacgaactggaa
gtgaagggcgagaacggcacccagctgatccgcttcgagcaatgcatcatcgccgccggt
tcgcaggcggtgaagctcggcaacttcccgtgggacgacaagcgggtgatggactccacc
gacgcgctggaactggccgacgtgccgaagaagttgctcgtcgtcggcggcggcatcatc
ggcctggaaatggccaccgtgtaccgcgcgctgggcagcgaagtcaccgtggtcgaattc
ctggaccaactgatgccgggcgccgatgcggatctggtcaagccgctggccgaccgcttg
aagaagcagggcgtggccgtgcatctcaagaccaaggccgcggccacgcaagcgctcaag
gacgggatcaaggtctccttcgaaagcgccgaggccggcaagacgccggcgctggaatcg
ggcgtgtacgaccgcgtgctggtcgcggtgggccgcgcgcccaacggcgccaagatcggc
gccgacaaggctggcgtgcaggtgagcgagcgcggcttcatcccggtcgaccggcagatg
cgcaccaacgtcgcgcacatcttcgccatcggcgacctggtcggtaacccgatgctcgcc
cacaaggccacccacgaaggcaagctcgccgccgaagtggccgcgggcgagaagaaggag
tgggtcgcgcgggtgattccgtcggtggcctacaccgacccggaaatcgcctgggtcggc
gtcaccgagaccgaagccaaggccaagggcctcaaggtcggcgtcggcaagttcccgtgg
gcggccagcggccgcgccatcggcatcggccgcaccgagggcttcaccaagctgatcttc
gacgaagccacccaccgcatcgtcggcggcggcatcgtcggcgtgcacgccggcgacttg
atttccgaagtggcgctggcgatcgagatgggctgcgaagtcgccgacatcggccacacc
atccacccgcacccgaccctgagcgagtcggtcggcatggccgccgaagtgttcgacggc
accatcaccgatctgtacatcccgaagaagaagtaa

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