Lysobacter enzymogenes M497-1: LEN_4555
Help
Entry
LEN_4555 CDS
T04598
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
lem
Lysobacter enzymogenes M497-1
Pathway
lem03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lem00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LEN_4555 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lem03021
]
LEN_4555 (rho)
03019 Messenger RNA biogenesis [BR:
lem03019
]
LEN_4555 (rho)
Transcription machinery [BR:
lem03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LEN_4555 (rho)
Messenger RNA biogenesis [BR:
lem03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LEN_4555 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA
Spore_III_AA
OB_RNB
S1CSD-TOTE-2
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAW00043
UniProt:
A0AAU9AM09
LinkDB
All DBs
Position
5665939..5667741
Genome browser
AA seq
600 aa
AA seq
DB search
MSDKTPDAGDTAEKRVRKPRASKAAEAAPAIVADASPLIPAPMPASEPAAAAAPAPRPSK
AAASAPAASAGESAPAASGAAETAAPQNNGPSNNGHANDGGGQSNNAQQQGQQNQAGQQR
DGGYDNNRGGNNRRDRFRNRRERDRNNRQQQRGGSGGEDFGDNGENFVPRPHPQVPEGFP
QYSLGDLKRMPAPKLLDLADQLSIQEGVARARKQDVIFALLKVLTRHGEGVAADGVLEIL
PDGFGFLRAAEASYLAGPDDTYISPSQIRRFNLRTGDHLSGRIRFPKDGERYFALSVVDS
INGEPLEASKNKVLFENLTPLFPRKRFRLERGDGSTEDITGRILDLMAPQGKGQRALIVS
PPKAGKTMMMQQVATAITHNHPDVHLIVLLVDERPEEVTEMQRTVRGEVVSSTFDEPAAR
HVQVAEMVIERAKRLVEHKKDVVILLDSITRLARAYNNVVPSSGKVLSGGVDANALHRPK
RFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNSEVHLNRRIAEKRVYPAI
DINRSGTRREDLLIEPELLQKIWILRKLLHGMDEIGAMEFLLDKMKTTKSNDEFFSSMKR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgataagacccccgacgctggcgacaccgccgagaagcgcgtgcgcaagccgcgc
gccagcaaagccgccgaggccgctccggccatcgtcgccgatgccagccccctgattccc
gcgccgatgcccgccagcgaacccgctgcggcagccgcgcccgcgccgcgcccgtccaag
gccgccgcgtccgccccggccgccagcgccggcgagtccgctccggccgcctccggcgcc
gccgagaccgccgcgccgcagaacaacggcccctccaacaacggccacgccaacgacggc
ggcggccagtccaacaacgcgcagcagcaaggccagcagaaccaggccggccagcagcgc
gacggcggttacgacaacaaccgcggcggcaacaaccgccgcgaccgcttccgcaaccgc
cgcgagcgcgaccgcaacaaccgccagcagcagcgcggcggcagcggcggcgaggatttc
ggcgacaacggcgaaaacttcgttccgcgtccgcacccgcaggtgcccgagggcttcccg
cagtattcgctgggcgacctcaagcgcatgccggcgccgaagctgctggacctggccgac
cagctgagcatccaggaaggcgtcgcccgcgcgcgcaagcaggacgtgatcttcgccctg
ctgaaagtcctgacccgccacggcgaaggcgtcgccgccgacggcgtgctggaaatcctg
cccgacggcttcggcttcctgcgcgcggccgaggccagctacctggccggcccggacgac
acctacatctcgcccagccagatccgccgcttcaacctgcgcaccggcgaccacctctcc
ggccgcatccgcttccccaaggacggcgaacgctacttcgccctgtcggtggtcgacagc
atcaacggcgagccgctggaagcgtcgaagaacaaggtcctgttcgagaacctgaccccg
ctgttcccgcgcaagcgcttccgtctggagcgcggcgacgggtccaccgaggacatcacc
ggccgcatcctcgacctgatggcgccgcagggcaaaggccagcgcgcgctgatcgtctcg
ccgcccaaggccggcaagacgatgatgatgcagcaggtcgccacggcgatcacgcacaac
catccggacgtgcacctgatcgtgctgctggtcgacgagcgtccggaagaagtgaccgaa
atgcagcgcaccgtgcgcggcgaagtggtctcctcgaccttcgacgaacccgccgcgcgc
cacgtgcaggtcgccgagatggtgatcgagcgcgccaagcgcctggtcgaacacaagaag
gacgtggtgatcctgctcgactcgatcacccgcctggcccgcgcctacaacaacgtcgtg
ccgagctcgggcaaggtgctgtcgggcggcgtcgacgccaacgccctgcaccgtcccaag
cgcttcttcggcgccgcgcgcaacgtcgaagaaggcggctcgctgacgatcatcgccacc
gccttgatcgacaccggcagcaagatggacgaggtgatctacgaagagttcaagggcacc
ggcaactcggaagtccacttgaaccgccgcatcgccgagaaacgcgtctacccggcgatc
gacatcaaccgttcgggcacgcgtcgcgaagacctgttgatcgagccggagctgctgcag
aagatctggatcctgcgcaagctgctgcacggcatggacgagatcggcgcgatggagttc
ctgctggacaagatgaagacgaccaagtcgaacgacgagttcttcagttcgatgaagcgc
tga
DBGET
integrated database retrieval system
