Lysobacter enzymogenes M497-1: LEN_4574
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Entry
LEN_4574 CDS
T04598
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lem
Lysobacter enzymogenes M497-1
Pathway
lem03420
Nucleotide excision repair
lem03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LEN_4574 (uvrD)
03430 Mismatch repair
LEN_4574 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lem03400
]
LEN_4574 (uvrD)
Enzymes [BR:
lem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LEN_4574 (uvrD)
DNA repair and recombination proteins [BR:
lem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LEN_4574 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LEN_4574 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
BAW00062
UniProt:
A0AAU9BB18
LinkDB
All DBs
Position
complement(5697295..5699472)
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AA seq
725 aa
AA seq
DB search
MDVSHLLDALNPAQREAVSAPPGHYLVLAGAGSGKTRVLTHRIAWLNEVLGVPTHGILAV
TFTNKAAGEMRARVDAQLARGARGMWIGTFHGLAHRLLRLHWQEAKLPEGFQVLDSDDQL
RLVKRVVQALELDETRFPPRQIAWWINAQKDEGRRPRNIQPGGDDWQDVMLRCYEAYQER
CERAGLVDFAELLLRAHELLRDNAALLAHYRTRFREILVDEFQDTNAIQYAFVRVLAGDS
GHVFVVGDDDQAIYGWRGAKVENVQRFLRDFPDAQTIRLEQNYRSSGNILEAANAVIAHN
PDRLGKKLWTDTGHGESIDLYAAYNEMDEARFVVERLRQWVRDGGSYGDVAVLYRSNAQS
RAFEEALLSEQVPYRVYGGQRFFERAEIKDTLAYLRLIANRADDAAFERAVNTPTRGIGE
RTLDEVRKRARTDAVPLWEGARRVAGETVLAARARNALAGFALMIDTMQADVAEMPLQEK
IDHVLQRSGLRDHYANESRGQLDSRTDNLDELVSVASRFSRSDEDEAAQMPELIAFLSYA
ALEAGEGQAQADEDGVQLMTLHSAKGLEFPLVFLGGLEEGLFPSGRSTEESGRLEEERRL
AYVGITRAREKLVLSYAETRRIHGMDMYGVPSRFLREIPSPLLNEVRPKVQVSRPMYRAA
PRRDMGHARIDESPIKLGAQVRHGTFGVGTVTDYEGDGAHARVQVNFDDVGSKWLVLAYA
NLQPA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcgcatttgctcgacgctctcaatccggcccagcgcgaagccgtttcggcg
ccgccggggcattatctggtcctcgccggcgcaggcagcggcaagacccgggtgctgacc
caccgcatcgcctggctcaacgaagtgctcggcgtgccgacccacggcatcctcgcggtg
acctttacgaacaaagccgccggcgagatgcgcgcgcgcgtcgacgcgcagctcgcgcgc
ggcgcccgcggcatgtggatcggcactttccacggcctggcccaccgcctgctgcgcctg
cactggcaggaggccaagctgccggaaggcttccaggtgctcgacagcgacgaccaactg
cgcctggtcaagcgcgtggtgcaggcgctggaactggacgaaacccgcttcccgccgcgc
cagatcgcgtggtggatcaacgcgcagaaggacgagggccggcgcccgcgcaacatccag
cccggcggcgacgactggcaggacgtgatgctgcgctgctacgaggcctaccaggagcgc
tgcgagcgcgccggcctggtcgacttcgccgaactgctgctgcgcgcgcacgagctgctg
cgcgacaacgccgcgctgctggcgcattaccggacccgcttccgcgagattttggtcgac
gagttccaggacaccaacgcgatccagtacgcgttcgtgcgcgtgctcgccggtgacagc
ggccacgtgttcgtggtcggcgacgacgaccaggccatctacggctggcgcggcgccaag
gtcgagaacgtgcagcgcttcctgcgcgatttccccgacgcccagaccatccgcctggag
cagaactaccgctccagcggcaacatcctcgaagccgccaacgcggtcatcgcccacaac
cccgaccgcctgggcaagaagctgtggaccgacaccggccacggcgaatcgatcgacctg
tacgcggcctacaacgagatggacgaggcgcgcttcgtggtcgagcgcctgcgccagtgg
gtgcgcgacggcggcagctacggcgatgtcgctgtgctctaccgcagcaacgcccagtcg
cgcgcgttcgaagaggcgctgctgtccgagcaggtgccttaccgcgtctacggcggccag
cgcttcttcgagcgcgccgaaatcaaggacacgctggcctatctgcgcctgatcgccaac
cgcgccgacgacgccgcgttcgaacgcgcggtcaacacgcccacccgcggcatcggcgag
cgcacgctggacgaggtgcgcaagcgcgcccgcaccgatgcggtgccgctgtgggaaggc
gcgcgtcgggtcgccggcgagaccgtgctggccgcgcgcgcgcgcaacgccctggccggc
ttcgcgctgatgatcgacaccatgcaggccgacgtggccgaaatgccgctgcaggagaag
atcgaccacgtgctgcagcgatcgggcctgcgcgatcactacgccaacgagtcgcgcggc
cagctcgattcgcgcaccgacaacctcgacgaactggtctcggtggcttcgcgcttcagc
cgcagcgacgaggacgaggccgcgcagatgccggagctgatcgcgttcctgagctacgcc
gcgctcgaggccggcgaaggccaggcgcaggccgacgaggacggcgtgcagctgatgacc
ctgcacagcgccaagggcctggaattcccgctggtgttcctcggcgggctggaagaggga
ttgttcccgagcgggcgttcgaccgaggaatccgggcgcctggaagaggaacgccgcctc
gcctacgtgggcatcacccgcgcgcgcgagaagctggtgctgagctacgccgagacccgc
cgcatccacggcatggacatgtacggggtgccgtcgcgcttcctgcgcgagatcccttcg
ccgctgctcaacgaagtgcggccgaaggtgcaggtgtcgcggccgatgtaccgcgccgcg
ccgcgccgcgacatgggccacgcgcgcatcgacgagtcgccgatcaagctcggcgcgcag
gtccgccacggcaccttcggcgtcggcacggtgaccgactacgaaggcgacggcgcgcat
gcgcgagtgcaggtcaactttgacgatgtcggcagcaagtggctggtgctggcttatgcg
aatctgcagccggcgtga
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