Leptolyngbya sp. NIES-3755: LEP3755_15580
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Entry
LEP3755_15580 CDS
T04199
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
len
Leptolyngbya sp. NIES-3755
Pathway
len03420
Nucleotide excision repair
len03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
len00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LEP3755_15580
03430 Mismatch repair
LEP3755_15580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
len03400
]
LEP3755_15580
Enzymes [BR:
len01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LEP3755_15580
DNA repair and recombination proteins [BR:
len03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LEP3755_15580
MMR (mismatch excision repair)
Other MMR factors
LEP3755_15580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DEAD
Viral_helicase1
DUF1978
AbiGi
CarD_TRCF_RID
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAU11065
UniProt:
A0A0S3U0M2
LinkDB
All DBs
Position
complement(1652971..1655304)
Genome browser
AA seq
777 aa
AA seq
DB search
MTVDFLSHLNPSQKQAVQHFCGPLLVIAGAGSGKTRALTYRIANLVLKHRVDPENILAVT
FTNKAAREMKDRIERLFAEQQALSEHGKPLESLPGHVQTKLRSQIYKTITKDLWIGTFHA
LCCRILRFDIEKFQDEKGRKWTRSFSIFDESDAQSLVKDIIINQLNIDEKKFDPRSVRFA
ISNAKNKGLSPRDYEKEQSNFRGKVIANVYSVYQDKLAENNAVDFDDLIWIPVQLFRQNE
QIRAYWHKRFRHILVDEYQDTNRTQYDLIQLLVTNGEAASRFDEWEYRSVFVVGDADQSI
YSFRMADFTILMGFQQDFGDGLPDDDTRTMVKLEENYRSTENILQLANELIENNTERIDK
ILKPTRGNGEPNFCYRAQDEIEEAEFVVQQMRRLESMNSDLHWGKFAILYRTNAQSRAFE
EILVRWGVPYKVVGGLRFYDRKEIKDVLAYLRAIANPADTLSLLRVINTPRRGVGKTTID
GLQKAAAELGVPLWDILSDETSIKTLAGRSSKGVIQFANIIQKWRSQLDVISASELVQGV
LEDSGYIADLKAQGTDEAEDRLQNVQELYNAVLQFEEESEDDKSLIGFLANASLASDLDD
VEEESSKVSLMTLHSSKGLEFPVVFLVGLEQGLFPSYRSLDDPAAIEEERRLCYVGITRA
QERLFISYARERRLYGNREPASPSLFLGEMPKELLESNMKSSIPKKFTTKPAAPVVQNAD
TDWSVGDRVMHSQFGIGEITNIFGSGNKATLAIRFDNLTGMKRKILSIADRALTLVD
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgactgttgattttctgagccatcttaatccgtctcaaaagcaagctgtccagcatttc
tgtggtccgttgctggtgattgctggcgcgggttcaggaaagaccagggcattgacgtat
cgcatcgccaatctggtgctgaaacatcgggttgatccagagaatatcctagcggtgaca
tttacgaacaaagccgctagagagatgaaagaccggattgagcgattgttcgcggaacag
caggcattgagcgaacatgggaagccgttagaatcgttgccgggtcatgttcagacgaaa
ctacgatcgcagatttataaaacaatcaccaaagatctgtggatcggaacctttcacgcg
ctctgttgtcgaattctgcgctttgatattgagaaattccaggacgagaaggggagaaaa
tggactcgatcgttctcgatttttgatgagtcagatgctcagagcttggtaaaagatatc
atcattaatcagttgaatattgatgagaaaaagtttgatccgcgatcggttcgatttgca
attagtaatgcgaagaataaaggactttccccgcgagattacgagaaagaacaatctaat
ttcagaggaaaagttattgcgaacgtttacagcgtttatcaagataagctcgctgaaaat
aatgccgttgatttcgacgatttgatctggattcccgttcagctatttcgtcagaatgaa
cagattcgagcctattggcataaacgttttagacatattctcgtagatgaatatcaagat
acgaatcggactcaatatgatctgattcaattgttggttacgaatggagaagcggcaagt
cgattcgatgaatgggagtatcgatcggtctttgttgtgggagatgccgaccagtcgatt
tattcgtttcgcatggcagatttcacgatcttgatgggatttcagcaagattttggagat
ggattgcccgatgacgatacgcggacgatggtgaaattagaagagaattatcgatcgaca
gaaaacattctccaactcgctaatgaactaatcgaaaataatacggaacgcatcgataaa
attctcaagccaactcgcggaaacggggagccgaatttttgttatcgcgctcaagatgag
attgaggaagcagaattcgttgtccaacaaatgcggcgattagagtcgatgaactccgat
ttacattggggcaaatttgcgattttgtatcgaacgaatgctcaatcgcgggcatttgaa
gaaattctagttcgctggggggtcccttataaagttgtgggcggtttgcgattctatgac
cggaaagaaattaaagacgttctggcttatctgagagcgatcgcgaatcctgccgatacc
cttagcctgctgcgggtgatcaatacgccgcgtcggggtgtgggtaaaacgacgatcgat
ggtcttcaaaaagccgctgctgaactcggtgtgccgctttgggacattctcagcgatgaa
acctcgatcaagactttagcaggacggtcttcaaaaggtgtgattcagtttgcgaacatt
attcaaaaatggcgatcgcaactggatgtcatcagcgcttctgaactggtacaaggcgtt
ttagaagattcgggttacattgctgatctaaaagctcaaggtacagacgaagccgaagat
cgcttacagaacgtgcaagagttgtacaatgctgtgctgcaattcgaggaagaaagcgaa
gatgataagagcttgatcggtttccttgcgaatgcgtctttagcttcggatttggacgat
gtggaagaggaatcaagtaaagtttctctgatgacattgcactcctcgaaagggctagag
tttccagtcgtgttcttggtcggtttagagcagggactctttccgagttatcgatcgctc
gatgatccggctgcgatcgaggaagaacgccgcttatgttacgtaggcatcactcgcgct
caagaacgtttgtttatctcttacgctcgtgaacgccgcttgtatggaaatcgcgaacct
gctagtccttccctgttcttgggtgagatgccgaaagagttgttggaaagcaacatgaaa
tcatcgattcccaagaagttcacaaccaagcctgctgcgcctgtcgttcagaatgcggac
acggattggagtgtgggcgatcgcgtcatgcacagccagtttgggattggcgaaattacc
aatatctttggctcaggcaataaagcgactttagcaattcggtttgataacttgacggga
atgaagcggaagattttatcgatcgccgatcgagctttgactttggttgattag
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