Leptolyngbya sp. NIES-3755: LEP3755_22230
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Entry
LEP3755_22230 CDS
T04199
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
len
Leptolyngbya sp. NIES-3755
Pathway
len03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
len00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LEP3755_22230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
len03021
]
LEP3755_22230
03400 DNA repair and recombination proteins [BR:
len03400
]
LEP3755_22230
Enzymes [BR:
len01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LEP3755_22230
Transcription machinery [BR:
len03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LEP3755_22230
DNA repair and recombination proteins [BR:
len03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LEP3755_22230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
Apocytochr_F_C
RNA_pol_Rpb1_3
Biotin_lipoyl
Biotin_lipoyl_2
RPOC_hybrid
RnfC_N
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
BAU11720
UniProt:
A0A0S3U2G6
LinkDB
All DBs
Position
2317727..2321692
Genome browser
AA seq
1321 aa
AA seq
DB search
MAEQNSEKQVFRNQVINKKELTNLISWAFTNYGTARTAQMADLIKDLGFRYATRAGVSIS
VDDLQIPPTKKALLDAATETIRDTEEKYTRGEITEVERFQKVIDTWNGASEELKDEVVRH
FRSNNPLNSVYMMAFSGARGNISQVRQLVGMRGLMANPQGEIIDLPIKTNFREGLTVTEY
IISSYGARKGLVDTALRTADSGYLTRRLVDVSQDVIIRELDCGTERGIPVRPMMDGDRVL
IPLKNRLLGRVAAQDVLNPENGEVIVARNEAISDDIAQIIGKKKVEQVVVRSPLTCESAR
SVCQHCYGWSLAHAHMVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGEMARQEKAN
FAGTVKVPKRLRTRPYRTRHGEDALIVESAGSEIKVTVEGANSQQQDFTVSQGATLMVRD
GQKVKAGQILAEVPLTGRGRKTTEKASKDVASDLAGEVRFADVVPEEKKDRQGNTTRTAQ
RGGLMWVLSGEVYNLPPGAEPVVKNGDRVEAGGTIAETKLVTENGGVVRLSETASENSKG
GRELQIITASVMLDEARVRAETHQGRDQYMLETTGNQTFLLKATPGTQVTNGQVVAELRD
DRYHTQTGGIIKYSGVEVGKKGKAKLGYEVIKGGTLLWIPEEAHEVNKDISLLMVEDGQY
VEAGTEVVKDIFCQSNGVIEVTQKNDILREVVIKPGDLHMIDSLDDVITREAVLVNPGQQ
VMPGLVSDELRYAEYVETPEGPAILLRPVTEFNVPDEPSVPSQDSTKEDSGRAIRLRAVQ
RLPYKDGERVKSVEGLELLRTQLVLEVDQDAQLAADIELIPDETDPEVMRLQLVILEALV
IRRDIAADVTQGSTQTEVMVKDGDQISAGAVVARTKIQCKEAGEVQGIRQGAESIRRILV
VRDADTVTIEANSPTAKAGELLIAGTDVGSGVTLEESGQVLNVAGNQVTLRVARPYRVSP
GAVLHVDDGDLVQRGDNLVLLIFERTKTGDIIQGLPRIEELLEARKPKEGCILARRAGTA
QVVYGEDDSVEVKVVDREGLITEYPIGPGQNVIISDGQEVAAGERLTDGPANPHELLEVM
FKAKLEEGALHDASLFSLREVQTFLVNEVQSVYQSQGIDISDKHIEVVVRQMTSKARVED
GGDTTMLPGELVEIYQIEQVNDAMSITGGAPAQYEPVLLGITKASLNTDSFISAASFQET
TRVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFNAYEEVGSPDVDPVYDPTIFDEDTD
FSEMVLDDRTARSYGLETLEERPSFSFESFGSTDDTDSDSIYSPILDDDDDLIADDMDED
L
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcagaactcagaaaagcaagtttttcgcaatcaggttatcaacaaaaaagaa
ctcacaaacctgatctcatgggcgttcaccaattatggcactgcccgcactgcacaaatg
gcagacttgatcaaagatctaggcttccggtatgcaacacgagcaggagtttcgatcagc
gttgatgatttgcaaatcccgccgaccaagaaagcgcttcttgatgccgcaaccgaaacg
attcgcgacactgaagagaagtacacacgcggcgaaatcactgaagttgaacggttccaa
aaggtgattgatacctggaacggagccagtgaagaactgaaagatgaagtggttcgacac
tttcgatcgaacaatcctctcaactcggtttacatgatggcgttctctggagcacggggt
aacatctcccaggttcgtcagttggtcgggatgcgcggtctgatggcaaacccacaaggg
gaaatcatcgacttaccgattaagaccaacttccgagaaggtttgaccgtcactgagtac
attatttcctcttacggtgcgcggaaaggtctcgtagatacagcacttagaacggctgac
tctggatacttaactcgtcgattagtcgatgtctcgcaagacgtgatcattcgtgaactc
gattgcggtacagagcgaggaattcccgttcgtccgatgatggatggcgatcgcgtttta
atcccgctgaaaaatcgtctcctcggtcgcgttgcggctcaagacgtgcttaatcctgaa
aacggagaagtgatcgtcgcacgtaacgaagcgatctccgatgacattgctcaaatcatt
ggtaagaagaaagtcgaacaagtcgttgtacgatcgccgctcacctgtgaatccgctcga
tcagtgtgtcagcactgttatggatggagtttggcacacgcacacatggtcgatattgga
gaagcggtcggaattatcgcggctcaatcgatcggggaaccgggcacacagttgacgatg
cggacattccacacgggtggggtcttcaccggagaaatggcgcgtcaagagaaagcgaac
ttcgctggaaccgtaaaagttccgaagcgcttgagaactcgcccctaccggactcgccac
ggggaagatgcgctgattgtcgaatcggctggctcagaaatcaaagtcaccgttgaagga
gccaattcacagcagcaagatttcaccgtttcgcagggtgcgaccttgatggtgagagat
ggacagaaagtcaaagctggacagattttggcagaagttcctttaaccggacgcggacgc
aagacaactgaaaaagcgtcgaaagacgtggcatctgacctcgcgggtgaagttcggttc
gcagatgtcgtacccgaagaaaagaaagaccgtcaaggcaatacgactcggactgcacag
agaggcggtttgatgtgggtgctatcgggtgaagtgtacaacctgccaccgggtgctgaa
cctgttgttaagaatggcgatcgagtcgaagcgggtggaacgatcgcagaaaccaaactg
gtgactgaaaacggtggggtcgttcgactctcagaaaccgcttcggaaaacagcaaaggt
ggacgtgagcttcaaattattaccgcatcggtgatgttggatgaagcgcgagttcgggcg
gaaacgcatcaaggacgcgatcagtacatgctcgaaaccacgggcaatcagaccttctta
ctgaaagcgacacccggaactcaggtcacgaacggacaagtcgtggcagaactgagagac
gatcgctatcacacccagaccggaggcattatcaaatactctggcgtggaagtgggtaag
aaaggaaaagccaaactcggttacgaagtgatcaagggcggaacgctactttggattcct
gaagaagcgcatgaagtcaacaaagacatttcactgctgatggtcgaagacggtcagtac
gtggaagcaggcacagaagttgtgaaagatatcttctgtcaaagcaacggtgtgatcgaa
gtgactcagaagaatgacattctgcgcgaagttgtgatcaaaccgggcgatctgcacatg
atcgatagcctggacgatgtgatcacacgggaagcagtcttggtcaatcctggacaacaa
gtgatgccgggattggtttctgatgaactgcgatatgccgaatatgttgaaacgcctgaa
ggtccggcaattctgctgcgtccagtgacggaattcaacgtaccggatgagccgtctgtg
ccgagccaagattcgaccaaagaagattctggacgggcaattcgcctcagagccgtacaa
cgcctgccgtataaagatggtgagcgcgtcaaatcggttgaaggattggaactgctccgg
actcagcttgttctcgaagtcgatcaagatgctcaactcgcagccgacatcgaattgatt
cctgatgagaccgatccagaggtcatgcgcttacagcttgtgatcctcgaagcgctggtg
attcgtcgtgatatcgcggcagatgtcactcagggtagtacccaaactgaagtgatggtc
aaagatggcgaccagatttcggcgggtgcggtcgtggctcggacgaagattcagtgtaaa
gaagcgggcgaagttcaagggattcgacaaggagcggaatcgattcgacgcattctcgtg
gtgcgcgatgccgatacagttacgatcgaagccaacagtccaaccgcgaaagcaggtgaa
ctcctgattgctggaaccgacgtgggttcaggtgtgacgcttgaagaatctggtcaagtg
ctcaacgttgctggaaatcaagtgacactgcgggtggctcgtccgtaccgcgtctctccg
ggtgcagtcttgcacgtcgatgatggagacttggtacaacggggcgataatctcgtactg
ctgattttcgagcgcaccaagactggagatatcattcaaggtctaccgagaattgaggaa
ctgctcgaagcgcggaaacccaaagaagggtgtatcctggctcgacgggcgggaactgct
caagtggtgtacggcgaggatgattcggtcgaagtgaaggtcgtcgatcgagaaggtttg
attaccgaatacccgatcggtcctggacaaaacgtgatcatctccgatggtcaagaagtg
gcggctggagaacgactcaccgatggtcctgccaatccccatgaactgctggaagtcatg
ttcaaagcaaagctagaggaaggcgcgttacacgatgcttcactgttcagcctgcgggaa
gtacaaactttcttggtgaacgaagtgcagtcggtctatcaatctcaaggcattgatatt
tcggacaagcatatcgaagtcgtcgtgcgtcagatgacctcgaaagcacgagtcgaagat
ggtggcgatacgacgatgctaccgggtgagttggtggaaatctaccaaatcgaacaggtg
aatgatgccatgtcgattacgggtggtgcacctgctcaatacgaacccgtgttgctcggt
attaccaaagcttcattgaacacggatagcttcatctcagcagcaagtttccaagaaacg
actcgcgttctgaccgaagccgcgatcgaaggaaaatccgactggctgcgcggtctgaaa
gaaaacgtgatcattggtcgtctgattccggctggaacgggcttcaatgcttacgaagaa
gtcggtagccctgatgttgatccggtctacgatccgaccatctttgatgaggatacggac
ttctcggaaatggtgcttgacgatcgtacggctcgttcttacggcttagagactttggag
gaacgcccaagtttcagctttgagagctttggaagcacagatgatactgattctgattcg
atctactcgccaatcttggatgatgacgatgacttgattgcagatgatatggatgaagac
ctgtag
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integrated database retrieval system
