Leptolyngbya sp. NIES-3755: LEP3755_29550
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Entry
LEP3755_29550 CDS
T04199
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
len
Leptolyngbya sp. NIES-3755
Pathway
len03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
len00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LEP3755_29550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
len03021
]
LEP3755_29550
03400 DNA repair and recombination proteins [BR:
len03400
]
LEP3755_29550
Enzymes [BR:
len01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LEP3755_29550
Transcription machinery [BR:
len03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LEP3755_29550
DNA repair and recombination proteins [BR:
len03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LEP3755_29550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RNA_pol_L_2
HHH_2
Motif
Other DBs
NCBI-ProteinID:
BAU12426
UniProt:
A0A0S3U4M4
LinkDB
All DBs
Position
complement(3047941..3048879)
Genome browser
AA seq
312 aa
AA seq
DB search
MAQFQVECIDTTTEKDQSQYSKFILEPLERGQGTTVGNALRRVLLSNLEGAAVTAVRIAG
VTHEFATIPGVREDVLDIMLNMKKLVFRTYSSQPQIGRLLVQGQATVTAESFDLPSEVEM
VDPDQYIATLAPNATLEMEFKIEKGKGYRGAGKFTDDTALDFLQIDSVFMPVRKVQYSVE
DARQGGTAEKDRLIMEIWTNGSLTPQEALSQAANILVDLFNPLKDITFEPSDDDGMSDER
IENQIPIEELQLSVRAYNCLKRAQINSVADLLDYSQEDLLEIKNFGAKSAEEVVEALQQR
LGITLPQEKSKS
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtggcacagtttcaggtcgaatgtattgataccacgacggaaaaggatcaaagccaatac
agtaagttcattttggagccgctagagcggggacaaggaacgacggttgggaatgcgctt
cgtcgcgtgttgctgtcgaacttagaaggcgcagcggtaacggcggtaaggattgcaggc
gtaactcacgagtttgcaacgattccgggcgttcgggaagatgtgctggacattatgctg
aacatgaaaaagctggtgttcagaacgtattcgtcgcagcctcagatcggtcggcttttg
gttcagggtcaagcgaccgtgacggctgaaagctttgatttgccttcggaagtggaaatg
gttgatccggatcaatacattgcaactctcgcgcctaacgcaacgttagagatggagttc
aagattgagaagggcaagggatatcggggggctggcaagttcacggatgataccgcgctc
gactttttgcaaatcgactctgtattcatgcccgtgagaaaggtacagtacagcgtcgaa
gatgctcgccaaggtggaacggctgaaaaagaccgtttgatcatggaaatttggacaaat
ggcagtttgactccgcaagaagcgctgagtcaggcggcaaatatcctagtcgatctgttt
aatccgctgaaagacattacgttcgagccttcggatgatgatggaatgagcgatgagcgg
atcgaaaatcaaatcccgatcgaagaactgcaactttcagtcagagcttacaactgtctg
aaacgcgctcaaatcaactcggtcgcggacttgctcgactacagccaagaagacctgctc
gaaataaagaatttcggggcaaagtctgccgaggaagtcgtcgaagcactgcaacaacgg
ttagggatcaccctgccgcaagaaaaatctaaatcctag
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