Leptolyngbya sp. NIES-3755: LEP3755_30160
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Entry
LEP3755_30160 CDS
T04199
Name
(GenBank) exonuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
len
Leptolyngbya sp. NIES-3755
Pathway
len03030
DNA replication
len03430
Mismatch repair
len03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
len00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LEP3755_30160
03430 Mismatch repair
LEP3755_30160
03440 Homologous recombination
LEP3755_30160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
len03032
]
LEP3755_30160
03400 DNA repair and recombination proteins [BR:
len03400
]
LEP3755_30160
Enzymes [BR:
len01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LEP3755_30160
DNA replication proteins [BR:
len03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LEP3755_30160
DNA repair and recombination proteins [BR:
len03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LEP3755_30160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
HTH_17
Motif
Other DBs
NCBI-ProteinID:
BAU12487
LinkDB
All DBs
Position
complement(3105984..3106757)
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AA seq
257 aa
AA seq
DB search
MLSTDLLAFYRDICSRTLTVVDLETSGHKPPRSRAIEVSVLNASLKDGILNQETYLINPG
VNLPPIITQITGITHEMLEDAPPPEEVWTKCLPLLEQGILTAHNISFDYPFIRSEYARLG
IPFYRSRSEQFCTVKFARLMLSELPSRSLPNLVKHFKFPVGESHRAESDTMACWLLAEML
LKEIANEDDEAVLARIGQQLLSISDVTKIIGGSQKTARARLDAAGVEPYISQRTGIHLFR
RADVERVYWQKHQLSLP
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgctttctactgatttgcttgcattttatcgagacatctgttcgcgaactttaacggtg
gtcgatctcgaaacatcgggacacaagccgcctcgcagtcgagcgatcgaggtttccgtt
ttaaatgcaagcctcaaagatggcatcctcaatcaagaaacgtatctgatcaatccgggt
gtgaatcttccgccgatcatcacccagattacgggcatcactcacgaaatgttggaagat
gcgccgccaccagaggaagtttggacgaagtgcttacccttgttagagcagggcattttg
accgcgcataatattagctttgactatccgtttattcgatcggaatatgctcggttaggg
attccattttatcgatcgagatccgaacagttctgcaccgtgaagtttgctcgattaatg
ttgtcggaacttccatcgcgcagcttaccgaacttagtcaaacacttcaaatttccagtt
ggcgaatcccatcgcgcagaatcagacacgatggcatgttggctcttagcggaaatgcta
ttgaaagagattgccaatgaagatgatgaagccgtgttagccagaattggacagcaatta
ctctcaattagcgatgtaacaaagattattggaggatcgcaaaagacagcacgtgctcga
ttagatgcggcaggtgttgagccttacatctctcagcgaaccggaatacacttgtttaga
cgggctgatgtcgagcgagtgtattggcaaaagcatcagttatccttgccttga
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