Leptolyngbya sp. NIES-3755: LEP3755_37030
Help
Entry
LEP3755_37030 CDS
T04199
Name
(GenBank) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
len
Leptolyngbya sp. NIES-3755
Brite
KEGG Orthology (KO) [BR:
len00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
len03016
]
LEP3755_37030
Enzymes [BR:
len01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
LEP3755_37030
Transfer RNA biogenesis [BR:
len03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
LEP3755_37030
Prokaryotic type
tRNA splicing ligases
LEP3755_37030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
Motif
Other DBs
NCBI-ProteinID:
BAU13166
LinkDB
All DBs
Position
complement(3769360..3770541)
Genome browser
AA seq
393 aa
AA seq
DB search
MPYEPLNLSTDKPVLSWANHELGTAETKMAKNVASLPFVFKHVSLMPDVHLGKGALVGSV
IATKDAIIPAAVGVDIGCGMAAIKTPYKSDQLEGKLKQIRLDLEAVIPTGFNENKESDRQ
VSNWQGWQDFKALHPGVKDLETKALRQMGSLGGGNHFLELCLDEDNAVWLMLHSGSRHIG
NILAQRHIDTAKNLAKMTDTKLPDPDLAHFVQGTAEFENYWHDLQWAQDYARFNRVVMMS
RFKRVVEKHLAGGKPMKPLLEVNCHHNYAEKEMHFDEEVFVTRKGAVRARSEDLGIIPGS
MGAKSYIVRGKGNVESYCSCSHGAGRLMSRNSAKKTYTLDDLIEQTKGVECRKDEGVLDE
IPGAYKPIEQVMANQADLVEVVATLKQVLCVKG
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgccttacgaacccttaaatctttccactgacaaacctgttttatcttgggcgaaccac
gaactcggaaccgctgaaaccaaaatggcaaagaatgtcgcgtctctgccgtttgtgttc
aagcacgtgtctctcatgcctgatgtgcatttaggaaaaggagcgctcgtcggttctgtc
atcgccaccaaagatgccattatcccggcagccgtcggagtagatatcgggtgtggaatg
gcagcaatcaaaacgccttacaaatcggatcaacttgaagggaaactgaagcaaattcga
ttagaccttgaagcagtgattccgactggatttaacgagaataaggagagcgatcgacaa
gtctcgaactggcaaggttggcaagacttcaaagcactccatccgggtgtgaaagatctc
gaaaccaaagccttgcgccaaatgggttcactcggaggtggaaaccacttcttagaactc
tgtttggatgaagacaatgctgtttggttaatgctccattctggttctcgacacatcggg
aatattctggctcaacgtcacatcgacactgcaaaaaatctggcaaagatgacggatacg
aagttacctgatcctgacttagctcactttgtacaaggaacggctgagttcgagaactac
tggcatgaccttcagtgggcacaggactatgctcgattcaatcgggttgtgatgatgtct
cggtttaagcgagtggttgagaagcatcttgcaggtggaaagccgatgaagccactgtta
gaagtgaactgccatcacaactatgcagaaaaagagatgcactttgacgaagaagtattc
gtgactcgaaaaggagccgttcgagcacgttccgaagacttgggcatcattcctggcagc
atgggggcaaaatcctacattgttcgtggaaaaggcaatgtcgaaagctattgttcttgt
tctcacggtgcaggtcgcttaatgtctcggaactcagcgaagaaaacctatacgttggat
gatctcatcgaacaaaccaagggcgttgagtgtcgcaaagacgaaggagttcttgatgaa
attccgggagcttataagccgatcgagcaagtcatggcaaaccaagccgacttagttgaa
gtggtcgcaaccttaaaacaagtattgtgcgtgaaaggttga
DBGET
integrated database retrieval system
