Leptolyngbya sp. NIES-3755: LEP3755_37190
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Entry
LEP3755_37190 CDS
T04199
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
len
Leptolyngbya sp. NIES-3755
Pathway
len03410
Base excision repair
len03430
Mismatch repair
len03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
len00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LEP3755_37190
03430 Mismatch repair
LEP3755_37190
03440 Homologous recombination
LEP3755_37190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
len03400
]
LEP3755_37190
DNA repair and recombination proteins [BR:
len03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LEP3755_37190
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LEP3755_37190
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LEP3755_37190
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
BAU13180
UniProt:
A0A0S3U6M8
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Position
3780687..3782945
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AA seq
752 aa
AA seq
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MTDPVSQWQIHADSDVPEPFVQAVKQLAGIEGRYLPRLLWQRGIREVEQLAGYLFAANYQ
PTSAIEFGQEMQWAVRRLRQAIGRKEAIAIWGDFDADGVTSTAVLWDGLGQFFPQNEKLF
YYIPNRFTESHGLSKTGIDQLKHVQVIVTCDTGSTNLEEIQYAQSLGIDVIVTDHHTLPE
LRPPVIAIVNPRSLEKDHPFASLSGVAVAYKLVEALYEALPDIPEKPIEHLLDLVAIGLI
ADLVELKGDCRYLAQKGIEQLQKQSTQEATRPGITRLLELCKRSGDRPTDISFGLGPRIN
AVSRIQGDAHFCVELLTSQDVQRCRELADETELANTRRKALQKDVLQQAKAKLAQIDLST
TGVIVLWDEQWSGGVLGLVAGQIAQEYGKPTILLTIDGEYAKGSARSTNRIDLYQLVKDQ
EHLLHRFGGHPFAAGLSLAIDNLPLFAQAINQRLLQQSDPPTPTIQADLCVTISELGLEL
YKELRLIEPCGMGNPIPKLLIQNCWFQAGRNMKLQDLRGRKVEYIRTPFTIWDETVEKGF
HGVWWGHYAYELPTGRCDAIVELENNTYHKRYEVRLVAVRACDEVNVTANLQWLLDWRTQ
RTEEKAIELKTAPASWIEFQTWFRRAINQQLPLAIAYPQPTVIPATEIWQTLVGIAKYLS
RTEKTATRQQFYDRLQIGDVALKAGIQALEQFGFHVTYENHCFKVTMSEVSHDKANTTIE
QFLTAVREEQFYRQYFAQVPFSTIQAIASQWN
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgactgacccagtttcgcagtggcaaattcatgctgattctgatgttccggagccgttt
gttcaagcggtcaagcaactggctggaattgaagggcggtatctgcctcgattgttgtgg
caacggggaattcgagaggttgaacagttagcgggctatttatttgcagcgaactatcag
ccgacgagtgccattgaatttggtcaagaaatgcagtgggcggtacggcgattgaggcaa
gcgatcgggcgaaaagaagcgatcgcaatctggggtgattttgatgccgatggggtcact
tcaacggcggtgctttgggatggtttgggacagttctttccgcagaatgaaaagctgttc
tactacattccaaatcggtttactgaatcacacggactttctaaaactgggattgatcaa
ctgaaacacgtccaagtgattgtgacttgtgacacgggcagtacgaacttagaagaaatt
cagtacgctcaaagtttgggaattgatgtgattgtgacggatcatcatacgctgccagaa
ttacgcccgcctgtgattgcgatcgtcaatcctcgatcattagaaaaagatcatcctttc
gcttcactctctggagttgctgtcgcttataagctcgtggaagccttgtatgaagcatta
ccggacatccccgaaaagccaattgagcatttacttgatttagttgcgatcggattaatt
gctgatttagttgaactaaaaggggactgtcgctatctagctcagaaaggaattgaacaa
ttacagaagcaatcgacccaagaagcaactcgtccgggtattaccagactgttagaactg
tgtaagcgatcgggcgatcgaccgactgatatttcgtttggcttgggtcctcgaatcaat
gcagtaagccgaattcagggtgacgctcatttttgtgtggaactgctaacgagtcaggat
gtgcaacgctgccgagaacttgcggacgaaacagaacttgcaaatactcgtcgtaaagcc
ttgcaaaaagatgtcctacagcaagcaaaagcaaaattagctcagattgatttatctaca
acaggcgtgattgtactgtgggatgaacaatggagcggtggtgtactcggattagttgca
ggtcagattgctcaggagtatgggaagccgacgattttactcacaattgatggtgaatat
gcgaagggatcggcacgatcgacaaatcgaattgatctttatcagttagtcaaagatcag
gaacatctgttgcatcggtttggaggacatccatttgcagcgggactgagtttagcgatc
gacaatcttccattatttgctcaagcgatcaatcagcgtttattacaacaaagtgatccg
cccactccaaccattcaagcggatctttgtgtcacgattagcgaactaggattagaactc
tacaaagagcttcgattgattgaaccttgtgggatgggcaatccaattccgaagttattg
atccaaaattgttggttccaagcaggtcggaatatgaagcttcaagatctgcgtggacgc
aaagtggaatacattcgcactccgttcacgatctgggatgaaaccgttgagaaaggattt
catggagtttggtggggacattatgcgtatgagcttccgacaggtcgatgtgatgcgatc
gttgaacttgagaacaatacttatcacaaacggtacgaagttcgattagtcgctgttcgc
gcttgtgatgaagtgaatgtgactgcaaatctgcaatggttattagattggagaacacag
agaacggaagaaaaagcaatcgagcttaaaaccgcacctgcaagttggatcgagtttcaa
acctggttcagacgagcaatcaatcaacagttaccattagcgatcgcatatcctcaaccg
actgtaattccagcaactgaaatttggcaaactttagtcggcattgctaaatatctgagt
cggactgaaaagactgcaactcggcagcaattctacgatcgcttacagatcggtgatgtg
gctctgaaagctggaattcaagctttagagcaatttggatttcatgtgacttatgagaat
cattgtttcaaagtcacgatgagcgaagttagtcacgataaagccaatactacgatcgaa
caatttctaacggctgtgcgcgaagaacagttttatcgacagtattttgcacaagttccg
tttagtacgattcaagcgatcgcgagtcagtggaactaa
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