Leptolyngbya sp. NIES-3755: LEP3755_37270
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Entry
LEP3755_37270 CDS
T04199
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
len
Leptolyngbya sp. NIES-3755
Brite
KEGG Orthology (KO) [BR:
len00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
len03400
]
LEP3755_37270
DNA repair and recombination proteins [BR:
len03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LEP3755_37270
Archaeal homologous recombinant proteins
LEP3755_37270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
Rad50_zn_hook
AAA_21
Laminin_II
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
BAU13188
UniProt:
A0A0S3U6N8
LinkDB
All DBs
Position
complement(3786514..3789582)
Genome browser
AA seq
1022 aa
AA seq
DB search
MIPQRLTLRNFLSYREAILDFQGLHTACVCGSNGAGKSSLLEAISWVLWGESRATSEDDV
IHLGSKEAQVEFIFQMHQQTYRVLRTRQRGQGVSLEFQIMQGSSFRSLTAKGIRSTQQLI
LTHLKLDYETFVNSAYLRQGRADEFMLKRPADRKQILADLLKLHQYDELSEQAKDKSRQF
KGQVELLERQLDAIREQLHQRDAIAQERAELETVLEQMQAQQSANHHQLQQFQAVQHQRQ
TWQQQLTWQQQQQRNLNQDCQRLQKERSQTDGQRQTLEYLLQQESRIIAGYQHWKALQAQ
EELFSAKFQSHQVAQSQRQQFEQHYSEKLQQLQNQLQKVQAQEITLQEQLQELQKSLSKE
ADVESAIGQLTSARQELQKLDQLQLQASPLLQRKQQIQQKLDRSFTRLSARLEELRTSAR
QLQTQQQRQPSLKKAAVEVAVKIDELEKLRAYQDQVRDKGLERRSFMEQLQAHQRNYEAQ
LAEIDHKIRMLEQERAAAITEEVEGTTIVQIKQLEFPPCPLCDRPLDEHHWRLVLEKQQA
QKEEILSEIWVIREQLTTSEREIQVLREEYTKIEQRLAQYGDTLERRGQLQEQLQNTAEV
QEQLTQLNSEAIKLEAQLKTRAFEPELHEELNILDRSLQQLNYDERDHALARGSVDRWRW
AEIRQAEIKQAKRRQANILHRQPTLKTQIEQLEQHCDRLNADLERGLQQYDRQIQEIGYN
LEQHNAIRSALRQAQPWQLRYQELQQAQQQYPQVQHRLHELTHTLQTRYNDLQTITHHCQ
ELIHALEKTPDLSTHIQALEQQIQQHRTKLDQHLAKLGRLQQQQQQQELLSQQFEEVNSQ
LKTARQQCRVYQELTQAFGKNGIQALMIENILPQLEATTNQILSRLSANQLHVQFVTQRN
RKSKTAKAMETLDILIADAYGTRPYETYSGGEAFRVNFAIRLALARLLAQRSGTALQMLI
VDEGFSNQDQEGCDRLIAAINAISSEFACILIITHMPHFREAFQARIEIAKHQNGSELTL
CL
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgattccgcaacgtctcacactgcgtaattttttaagttaccgggaagccatcctcgac
ttccaggggcttcatactgcctgtgtgtgcggttccaacggtgcagggaaatcatcgctc
ctggaagccatttcctgggtgctgtggggagaaagccgcgctacttcagaagatgatgtc
attcacctgggatcaaaagaggctcaggtagaattcatctttcagatgcaccagcaaacc
tatcgagtcctgagaactcgccaacgcggtcaaggagtctcactcgaattccaaatcatg
caagggagcagttttcgatcgctaaccgcaaaaggcattcgatcaacgcagcaactcatt
ctcacgcatctcaaactcgattatgaaaccttcgtcaattctgcctatctacgtcaaggt
cgggctgacgaattcatgctcaaacgtcccgccgatcgcaaacaaattctcgctgattta
ctaaaacttcatcagtacgatgaactgtcagagcaagcgaaagataaatcgcgacagttc
aaaggacaagtcgaactcttagaacggcaactcgatgcgattcgagaacagttgcaccaa
cgagatgcgatcgcacaagaacgtgcagaactcgaaaccgttctcgaacagatgcaagcc
caacaatcggcaaatcatcaccagctacaacagttccaagccgtccaacatcagcgtcaa
acctggcaacaacaactcacttggcaacaacaacaacagcgcaatctaaatcaagactgt
caacgattacaaaaagagcgatcgcaaaccgacggacagcgccaaaccttagaatatctt
ttgcagcaagaaagtagaatcattgcaggttatcaacattggaaagcgcttcaggcacaa
gaggagcttttctctgccaagttccaatcccatcaagtcgctcaatctcagcggcaacaa
ttcgagcagcattattcagaaaagctccaacagttacagaatcagcttcagaaagttcaa
gcacaagaaatcacgctgcaagaacaactacaagagttgcaaaaatccctgagcaaagaa
gcggatgtagaatctgcgatcggacaattaacttcagcccgacaagaactgcaaaagctc
gatcagctacaattacaagcttctccacttcttcagcgcaaacaacaaattcaacaaaag
ctcgatcgttcttttactcgtctgtctgcccgactcgaagaactccgcacttctgcccgt
caactccaaacccaacaacaacgccaaccgagtctgaaaaaagcagccgtcgaggttgcc
gtaaaaattgacgaactcgaaaagcttagagcataccaagatcaagttcgggataaaggc
ttagagcgtcgaagtttcatggagcagttacaagcacatcagcgcaactatgaagctcaa
ctggctgaaattgatcataagattcggatgctagaacaagaacgagcagccgctatcaca
gaagaagtcgaaggaacgacgatcgttcaaatcaaacaattagagtttccgccttgtcct
ttgtgcgatcgacctctagacgaacatcactggcgcttagtcttagaaaaacaacaagcc
caaaaagaagagatcctttctgaaatttgggtcatccgcgaacaattaaccacttcagag
cgtgagatccaagttctgcgagaagagtacaccaaaatcgaacagcgacttgctcaatac
ggagataccttagagcgacgtggacagttacaagaacaattacaaaacactgcggaagtt
caagaacaattaactcaactcaacagtgaagcgatcaagcttgaagcacaactgaaaacg
agagcatttgagccagaattgcacgaagagttgaatattctcgatcgcagtttgcagcaa
ttaaactacgacgaacgcgatcatgcgcttgctcgtggaagtgtcgatcgctggcgttgg
gcagaaattcgacaagctgaaatcaaacaagccaaacgccgacaagcaaacattctgcat
cgtcagccgactttaaagactcagatcgaacaattagagcaacactgcgatcgtttaaac
gctgatttagagcgaggattgcaacaatacgatcgacaaattcaagagatcggctacaac
ttagagcaacacaatgcaatccgatcggcactccgtcaagctcaaccctggcaacttcgc
tatcaagaactccaacaagctcaacagcagtaccctcaagtacaacatcgtttacacgag
ctaacacacacgttacagactcgctacaatgacctgcaaactattacacatcattgccaa
gaactgatccatgctctagaaaaaacacccgatctcagcactcacatccaagcattagaa
caacaaatccaacaacatcgtacaaaactcgatcaacatctcgcaaaacttggaagactc
caacagcagcaacaacaacaagaactgctcagtcaacaatttgaggaagtcaattctcaa
ctcaaaaccgctcgtcaacaatgccgcgtttatcaagaactcactcaagcgttcggtaaa
aatggcatccaagccttgatgattgaaaatattctgccccaactcgaagccactaccaat
caaattttgtcccgcctcagtgcgaatcagcttcacgtccaattcgtcacccagcgcaat
cgcaagtccaaaaccgcgaaagcaatggaaaccttagacattctaattgccgatgcgtat
ggcactcgtccttatgaaacctattcgggcggtgaagctttccgagtcaatttcgcgatt
cgattagcattagcgcgactactcgcccaacgatcgggaactgcgcttcaaatgctgatt
gtcgatgaaggcttcagtaaccaagaccaagaaggatgcgatcgcttaattgccgcgatc
aacgctatctcatccgagttcgcctgcattctgatcatcacgcacatgccccatttccga
gaagccttccaagcccgcatcgaaatcgccaaacaccaaaacggctccgaattaaccctg
tgtttatga
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