Leptotrichia sp. oral taxon 212: AMK43_00620
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Entry
AMK43_00620 CDS
T04044
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
leo
Leptotrichia sp. oral taxon 212
Pathway
leo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
leo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AMK43_00620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leo03400
]
AMK43_00620
Enzymes [BR:
leo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMK43_00620
DNA repair and recombination proteins [BR:
leo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AMK43_00620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_C
PriA_3primeBD
Helicase_C
Zn_ribbon_PriA
AAA_30
SLFN-g3_helicase
nSTAND3
AAA_19
nSTAND_NTPase5
Zn_ribbon_6
zf-C3HC4_3
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
ALA94751
LinkDB
All DBs
Position
117486..119696
Genome browser
AA seq
736 aa
AA seq
DB search
MYYYEIYVENNVNIYTYKSMEEYEPGEWCIVNFVNRNKTGLIISETKEKNISIDVSKIKY
IIGKAPILSIPENIMKLVRWIKDYYISDYYNVIRTVYPGTLKLNYSKKAIYVKNLEEKET
KTENMHLFEENNEKLSETEKFNRYMQKKKEVTVATLDKNFSPDIIKRALKEEAVKIEKKL
IMNSKKMSGEKIKGKIADDDVVLNEEQQKVADRIKNGEKSFYLLKGVTGSGKTEIYINLI
KEAIKNGYGSLFLVPEISLTAQMTERLEKQFSDSVAILHSKLTDAEKRKEWTYIRTGEKK
IVIGARSAIFAPVQNLKYIIIDEEHENTYKQDNNPRYHTKNVAIKRALIEGDVKVIFGSA
TPSFESYYQAEKNDIELVELKERFNSAKMPDYEIVDLNDTPDNFSEELLKEMSGALGRKE
QVILILNRKAFANLLKCKECGHIPTCPNCSISLSYYKYENKLKCSYCGYEKYFNGKCESC
GSEKIMQIGTGTEKIEEEIKSYFPESRTVRVDSETVKTKKDYEDIYNDFKNHKYDIMLGT
QIIAKGFHFPDVTLVGIINSDIILNFPDFRAGEKTFQLLTQSSGRAGRGSKDGKVVIQTF
NGENEVIQNTVTGNYEGYYRKEMELRKILNYPPFGRLIIIVVSSEEEEELGKKARKFYNI
LMTGLNSGTNPNGNEFVSEPFKAPIYKINGRYRYQIFVKFNRKNITKVKNVIRKAMNEYK
EKKTRISVDVDPVSML
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtattattatgaaatatatgtcgaaaataatgtaaatatatatacctataaatcaatg
gaagaatatgaacccggagaatggtgtattgtaaactttgtaaacagaaataagacagga
ctgattatttctgaaacaaaagagaaaaatatatcgatagatgtttcaaaaataaagtat
atcataggcaaagctcctattttgtctattccggaaaatataatgaaactggtcagatgg
ataaaggactactatataagtgattattacaatgttataagaactgtgtatccgggaact
ttgaaactgaattattcaaaaaaggcaatatatgtgaagaatctggaagaaaaggaaaca
aaaacagaaaatatgcacctttttgaagaaaataacgaaaaattgagtgaaactgaaaag
ttcaacaggtatatgcagaaaaaaaaggaagtgacggtagcgacacttgataaaaatttt
tctcctgatataataaaaagggctttgaaggaagaggccgtaaagattgaaaagaaactg
ataatgaacagcaaaaaaatgtcaggtgaaaaaataaaagggaaaatagctgatgatgat
gttgtcctgaatgaagagcagcagaaggttgcagatagaataaaaaatggcgaaaaaagt
ttttatctgttaaaaggtgttacaggatcaggtaaaactgaaatatatataaatcttata
aaggaagcaataaaaaatggttacggaagtttgttcctcgtacctgagatttctcttact
gcccagatgacagaaaggctggaaaaacagttttcagattctgtggccatacttcatagc
aagctgactgatgcagaaaagagaaaggaatggacttacataaggacgggggagaaaaag
atagtcattggagccagatctgcgatatttgctcctgtgcagaacctgaaatacataata
atagatgaagaacatgaaaatacatataaacaggataacaatccgagatatcatacaaaa
aatgtggcaataaaaagagccttgattgaaggggatgtaaaggtaatttttggatcggca
acaccttcatttgaatcctattatcaggccgaaaaaaatgacattgagctcgtggaactg
aaagaaagatttaacagtgcaaaaatgcctgattatgaaatagtcgatctgaacgataca
cctgataatttctcggaagaactgctgaaggaaatgtcaggggcactgggaagaaaagag
caggtaatactcatcttaaacaggaaagcgtttgcaaatcttctgaaatgcaaggaatgc
gggcatatacctacatgtcccaactgcagtatatccttgagttactataagtatgagaat
aagctgaaatgcagctactgcggttatgaaaaatattttaacgggaaatgtgaatcatgc
ggaagcgaaaaaatcatgcagattggaacaggaactgaaaagatagaggaagagataaag
tcatattttcctgaaagcaggactgtaagagttgattctgagacagtgaagacaaaaaag
gactatgaagatatatacaatgactttaaaaatcacaaatatgatataatgctcggaaca
caaattattgcgaagggatttcattttcctgatgttacgcttgtaggaattatcaactct
gatataatacttaattttcctgatttccgtgcaggagaaaagactttccagctgctgaca
cagtcatcaggaagggcaggacgaggcagcaaagacggaaaagtggtaatccagacattt
aatggagaaaatgaagtcatacagaatacggttacaggaaattatgaaggatattacaga
aaggaaatggagttaagaaaaatattgaattatccgcctttcggaagactcataattata
gtggtgtcttcagaagaagaggaagaactgggaaaaaaggcaaggaaattctacaatatt
cttatgacaggtctgaacagcggaacaaatcccaatggaaatgaatttgtatcagaacct
tttaaggcacctatttataaaataaacggaagatacagatatcagatatttgtaaagttt
aacaggaaaaatattacaaaagtaaaaaatgtaataagaaaagcaatgaatgaatataag
gaaaaaaagacaagaataagcgtagatgtagatcctgtttccatgttatag
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