Leptotrichia sp. oral taxon 212: AMK43_01295
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Entry
AMK43_01295 CDS
T04044
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
leo
Leptotrichia sp. oral taxon 212
Pathway
leo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
leo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AMK43_01295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
leo03021
]
AMK43_01295
03400 DNA repair and recombination proteins [BR:
leo03400
]
AMK43_01295
Enzymes [BR:
leo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AMK43_01295
Transcription machinery [BR:
leo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AMK43_01295
DNA repair and recombination proteins [BR:
leo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AMK43_01295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
HHH_5
Ribosomal_TL5_C
Motif
Other DBs
NCBI-ProteinID:
ALA94868
UniProt:
A0A0K2J8T9
LinkDB
All DBs
Position
261316..262284
Genome browser
AA seq
322 aa
AA seq
DB search
MLNIEKIAKNIKLTEEKEGRHSAKYILEPLYRGYGNTIGNALRRILLSSIPGSAIKGLRI
DGVLNEFSTIPGVKEAVTDIILNVKEIVVELDEPGEKKMFLSVKGPKVITAADIKVEAGI
KIINPEQVIATVTTDKEINMEFLVDSGEGFVVSDEIDTEGWPIGYLAVDAIYTPIKKVNY
RVEDTMVGRVTNYDKLVLEISTDGSIEIQDALSYAVELLKIHVNPFTNIGNNMSKFRGNE
DETAAMSTETENNIEDMKIEELDFTVRSYNCLKKAGVNTISDLTSMSYIELLKIKNLGRK
SLNEIIDKMKELGYDLSEEASN
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
ttgttgaatatagaaaaaatagctaaaaatataaagttaactgaagaaaaagaaggaaga
cattccgctaaatatatactggaacctctttacagagggtacggaaatactataggaaat
gctttaagaagaatattattatcatcaatacctggatctgcaataaaaggacttagaata
gacggagtattaaacgaattttctacaatacctggagtgaaggaagctgttactgacatt
atattaaatgttaaggaaatagttgttgaacttgatgaaccaggtgaaaagaagatgttc
ctgtctgttaaagggcctaaagttattacagcggcggatataaaagttgaggccggtata
aaaattataaatcctgagcaggttattgcaactgttacaactgacaaggaaataaatatg
gaatttttagttgattcaggggaaggatttgtagtttcagatgaaatagatactgaaggt
tggcctatagggtatctagcagtggatgcaatatatacacctattaaaaaggtaaactat
agagtagaagacactatggttggtagggttacaaactatgataaattagttctggaaatt
tctactgatggaagtatcgaaatacaggatgcactgtcttatgctgtagaattacttaaa
atacatgttaatccatttactaatattggaaataacatgagcaaattcagaggcaatgaa
gatgaaactgcagcaatgagtactgaaactgaaaacaatattgaagacatgaaaatagaa
gaacttgactttactgtaagatcttacaactgtctgaaaaaagcaggagtaaatactata
tcagatttaacttcgatgtcatatattgaattactgaaaattaaaaacctgggtagaaaa
tctttaaatgaaataatagataaaatgaaagaacttggctatgatttaagtgaggaagcc
agtaattaa
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