Leptotrichia sp. oral taxon 212: AMK43_05465
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Entry
AMK43_05465 CDS
T04044
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
leo
Leptotrichia sp. oral taxon 212
Brite
KEGG Orthology (KO) [BR:
leo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leo03400
]
AMK43_05465
DNA repair and recombination proteins [BR:
leo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AMK43_05465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
Lon_C
ChlI
DUF7125
DnaB_C
AAA_24
nSTAND3
AAA_14
GvpD_P-loop
ABC_tran
AAA_22
FeoB_N
nSTAND_NTPase5
AAA_16
AAA
CobU
AAA_18
NTPase_1
AAA_5
SLFN-g3_helicase
AAA_19
ATPase_2
Elong_Iki1
TK
AAA_17
AAA_28
MeaB
RsgA_GTPase
MMR_HSR1
DUF7129
AAA_29
NB-ARC
NACHT
VapE-like_dom
zf-RING_10
AAA_30
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ALA95552
LinkDB
All DBs
Position
1140102..1141469
Genome browser
AA seq
455 aa
AA seq
DB search
MATSKGNYGKTKYICSECGYNSQKWLGKCPNCDSWGTFEEEVDIKRTLKNIQSEEVSISK
ISEIEIAKEFRMVTQYEEFDRVLGGGLIKGEVVLITGSPGIGKSTFLLQLSEEYSKIGNV
FYVSGEESPRQIKQRAERINVNSGNLYILNDTNIEKIEKVVLEDKPKVVVIDSIQTLYSE
NVNSVPGSVTQIRETTLKIIEIAKKHEIAFYIVGHVTKDGKLAGPKLLEHMVDAVLQIEG
EENSYYRIVRSIKNRYGSTNEISIFDMKENGISEVKNPSEFFISDREEKNIGSIIVPIFE
GSRVFLFEIQSLLGTPNFGMPRRTVEGYDRNRVEILSAVLSRSLNLDVNSKDIYINIPGG
IELNDRSSDLAVVFSLLSSVNKIPISQKIAAIGELGLRGEVRKVSFIKKRINELEKLGFT
GVYLPKSHESDLKKEKIKLKLNYISNISELIERVK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatctaaagggaattatggtaaaactaagtatatatgttctgaatgtggctat
aattcgcaaaaatggcttggaaaatgtccaaattgcgactcgtgggggacttttgaagaa
gaggtggatataaagagaacgctgaaaaatattcagtcagaagaggtttcaatcagtaaa
ataagcgagatagaaatagcgaaggaatttagaatggtaactcagtatgaagaatttgac
agagttcttggcggaggacttattaaaggtgaagtagttctgattaccggaagccctgga
ataggaaaatcaacatttttactgcagctgtctgaagaatattccaaaataggaaatgtc
ttctatgtttcaggagaagaatctccaaggcagataaaacagagggcagaaagaataaac
gtaaatagtgggaacttatatattcttaatgacacaaatatagaaaagattgaaaaagtt
gtattagaagataaaccaaaagtagtagtcatagattctattcagactctatactctgaa
aatgtaaattcggttccaggaagtgtaacacagataagggaaacaaccctaaaaataata
gaaatcgccaagaaacatgaaatagctttttacattgtaggacatgtaaccaaggatgga
aaacttgcaggaccgaaactgcttgaacatatggttgatgcagttttacagatagaagga
gaagaaaacagctattatagaatagtccgttctataaaaaacagatatggctcaacaaat
gaaatctcgatatttgatatgaaggaaaatggaataagtgaagtaaaaaatccttcagag
ttttttataagtgacagggaagaaaaaaatattggaagtattattgtacctatatttgaa
ggaagccgtgtgtttctttttgaaatacagtcactccttggaactccgaattttggaatg
cccagaagaactgtggaaggatatgacagaaacagggtggaaattttaagtgctgttctg
tcacgctcattgaatttagatgttaattcgaaggatatatatataaacattcctggtgga
atagagcttaatgacagaagttcagatctggctgtagttttttccctactttcttcagta
aataaaatacctataagtcaaaaaattgcggctataggagaattaggactaagaggggaa
gtaagaaaagtttcatttataaaaaaaagaataaatgaactggaaaaacttggatttaca
ggtgtatatctaccaaagagccatgaatccgatctgaaaaaggaaaaaataaaactgaaa
cttaattatataagtaatataagcgagttaatcgaaagggtgaaataa
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