Leptotrichia sp. oral taxon 212: AMK43_06245
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Entry
AMK43_06245 CDS
T04044
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
leo
Leptotrichia sp. oral taxon 212
Pathway
leo03420
Nucleotide excision repair
leo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
leo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMK43_06245
03430 Mismatch repair
AMK43_06245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leo03400
]
AMK43_06245
Enzymes [BR:
leo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMK43_06245
DNA repair and recombination proteins [BR:
leo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMK43_06245
MMR (mismatch excision repair)
Other MMR factors
AMK43_06245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
DEAD
FWWh
Terminase_6N
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
ALA95682
LinkDB
All DBs
Position
complement(1326356..1328554)
Genome browser
AA seq
732 aa
AA seq
DB search
MSILDELNEEQRKAAEKIDGPVLILAGAGSGKTRTVTYRIAHMIKEKGISPLNIMALTFT
NKAAKEMKERAEALIGPDANNLVVSTFHSFSVRLLKTYSDRIGYGRNFNIYDVDDQKTII
NKIKKDMNIKNDDISPAKTAGRISKLKEQGIGIEELEEQIDIRIPANRIFRDIYQKYDET
LKANNAMDFSDLLLNAKKLLEDPYVLERVQDRYRYIVVDEYQDTNDIQYEIISKIAEKYK
NICVVGDEDQSIYAFRGANINNILNFERDYKNAFVAKLEQNYRSTKTILDTANELIKNNK
SSKGKKLWTNGEKGEKIKVFNAPTVYDEAEFIVNEIKAKSKDGKLYKEMTILYRTNSQSR
VLEEKLLAANIPYKIYGGMQFFQRKEIKDILAYLNLLNNPNDNHNFYRIINVPKRSIGDK
TLEKLGQIANEKGISMLESTKYIDEIPGIRASVKEAAKDFYKMMHEIYENLDELSIKEVF
DEVLIKTKYIDSIEDNKEDRVKNIEELLNSISESERQNPGMSLSEYLDMVSLTSSTDDIE
DEENFIKLMTIHSSKGLEFDYVFIAGMEDGLFPSCNFDTSEEEIEEERRLCYVAVTRAKK
ELYISHVSERMVWGQMNYMIKPSRFIYEMKQGNLEYLSEKFKSFSKKMENATVVNKETRR
KIENFNPFSLKSVRTSELKNKGKSKYKVGDTVDHIKFGKGKIKKVDEKSLVIDFMTGEKK
IALILAEKLLKG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgagtattttagatgaactaaatgaagaacagagaaaagcagctgagaaaattgacgga
cctgtattaatactggctggagctggaagtggaaaaacaagaacagttacatatagaata
gctcatatgataaaggaaaaaggaatttctccgctgaatataatggcacttacatttaca
aataaagctgccaaagaaatgaaagaaagggcagaagctctgatcggaccggatgcaaat
aatcttgtagtatcaactttccattcgttttcagtaagacttttaaaaacatattctgac
aggataggatatggaagaaattttaatatttatgatgtagatgatcagaaaactattatt
aataaaataaaaaaagatatgaatataaaaaatgatgacatatcacctgctaaaactgca
ggtagaatcagtaaacttaaagaacagggaataggaatagaagagctggaagaacagatt
gacattagaattcctgcaaatagaatttttagggatatttatcagaaatatgatgaaaca
ttgaaggcaaataacgccatggatttttcagatttactgcttaatgcaaagaaactgctt
gaagatccatatgtgctggaaagagttcaggacagatacagatatatagttgtggatgaa
tatcaggatacaaacgatatccaatatgaaataataagtaaaattgcagaaaaatataaa
aatatatgtgttgtaggagacgaagatcagagtatatacgcctttagaggtgcaaatata
aataatatcctgaattttgaaagggattataaaaatgcatttgtagctaaacttgagcag
aactaccgatctactaaaacaatacttgatactgcaaatgagcttataaaaaataataaa
agctcaaaaggaaagaaactttggactaatggagaaaaaggagaaaaaataaaagttttc
aatgctcctactgtctatgatgaagctgaattcattgtaaatgaaataaaagccaagtct
aaagatggaaaactctacaaggaaatgacaatactttacagaacaaactcacagtcacgt
gttctggaagaaaagcttcttgcggcgaatattccttataaaatctatggtggaatgcag
ttcttccagagaaaggaaataaaggatattctggcgtatctgaatttactgaataaccct
aatgataatcataatttttatagaataataaacgttccaaaaagatcaataggagataag
acacttgaaaaactgggtcaaattgcaaatgaaaaaggaatttcaatgctggaatcaaca
aaatatattgatgagattccaggaataagagccagtgtcaaggaagcggcaaaagatttt
tataaaatgatgcatgaaatatatgaaaatcttgatgaactttcaataaaagaagtgttc
gatgaagtgcttataaagacaaaatatattgattcgatagaagataataaggaagacagg
gtaaaaaacattgaagaactgctgaacagtatatcagaatctgaaagacagaatcctgga
atgtccctgagtgaatatctggatatggtttcactgacttcatcaactgatgatattgaa
gatgaagaaaattttataaaattaatgacaattcacagttcaaaaggccttgaatttgac
tatgtgtttattgctggaatggaagatggactttttccttcatgtaattttgatacttct
gaggaagaaattgaagaagaaagaagactctgctatgttgctgttacaagagcaaaaaag
gaactctacatttcccatgtttcagaaagaatggtatggggacaaatgaactatatgata
aaaccttcaagatttatttatgagatgaagcagggaaaccttgaatatttatcagagaaa
tttaagagtttcagtaaaaagatggaaaatgcaactgttgtaaataaagaaacaagaaga
aaaatagagaattttaatccattttcattaaaatcagtgagaacttccgaactgaaaaat
aaaggaaaatctaaatataaagttggagatactgtagatcatattaagtttggaaaaggt
aaaattaaaaaggttgatgaaaaaagtctggtaattgattttatgacaggagaaaagaaa
atagccttaattcttgcagaaaaacttctgaaaggctag
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