KEGG   Leptotrichia sp. oral taxon 212: AMK43_07065
Entry
AMK43_07065       CDS       T04044                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
leo  Leptotrichia sp. oral taxon 212
Brite
KEGG Orthology (KO) [BR:leo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:leo03032]
    AMK43_07065
   03036 Chromosome and associated proteins [BR:leo03036]
    AMK43_07065
   03400 DNA repair and recombination proteins [BR:leo03400]
    AMK43_07065
DNA replication proteins [BR:leo03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AMK43_07065
Chromosome and associated proteins [BR:leo03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    AMK43_07065
DNA repair and recombination proteins [BR:leo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      AMK43_07065
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 DUF2530
Other DBs
NCBI-ProteinID: ALA95815
UniProt: A0A0K2JB67
LinkDB
Position
complement(1534395..1534670)
AA seq 91 aa
MSKKEFVEAYAKATGETKKRAEELVNEFLGTVEKSLVKGETVQFVGWGTFDVQKRAARTG
RNPQTGKEIKIAAKKVVKFKVGKKLAEKVAK
NT seq 276 nt   +upstreamnt  +downstreamnt
atgtcaaaaaaagaattcgtagaagcttatgcaaaagctacaggagaaactaaaaaaaga
gcagaggaattagtaaatgaatttttaggaacagttgaaaaatctttagtaaaaggtgaa
acagttcaattcgttggatggggaacatttgatgttcaaaaaagagctgccagaacagga
agaaacccacaaactggaaaagaaatcaaaatagctgcaaaaaaagtagttaaattcaaa
gtaggtaaaaaattagctgaaaaagttgctaagtaa

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