Leptotrichia sp. oral taxon 212: AMK43_07090
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Entry
AMK43_07090 CDS
T04044
Name
(GenBank) ribonuclease
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
leo
Leptotrichia sp. oral taxon 212
Pathway
leo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
leo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMK43_07090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leo03019
]
AMK43_07090
Messenger RNA biogenesis [BR:
leo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AMK43_07090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
TMP-TENI
FUT8_N_cat
Motif
Other DBs
NCBI-ProteinID:
ALA95819
UniProt:
A0A0K2JB74
LinkDB
All DBs
Position
complement(1538723..1540297)
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AA seq
524 aa
AA seq
DB search
MPLPITILLIIIFSFLAFFVAYFYGSSIFKKKYGELSELELRIVDAKRRLESSKKEVERE
IESFRKEETLKVKEELLNEKKIADDEIKKMKSEIVSKEERIAKKEEILETKTERLEDKEA
KMEKQREKLVRKETELNELISKEEKELERISELTKEDAAKIILTKLENQLDHDKAILIRD
FEHNLDREKDRISKRIISTAIGKASADYVVDSTISVIQLPSEEMKGRIIGREGRNIRAIE
AATGVDLIIDDTPEAVVLSSFDGVRREVARIALEKLISDGRIHPTKIEEVVAKAQEEVEE
SVLDAAEQAILEVGIPTLPREVLKVFGRLKFRTSFGQNILQHSIEVAHIAAALAAEIGAN
VDVAKRAGLLHDIGKAFSHEQEGSHAINGGEFLRKFSKENEIVINAVESHHNEVEQLSVE
AVLVQAADSISASRPGARRETLSNYLKRLEQLEEIANSHEGIESSYAIQAGRELRLIVHP
DEIDDDRAMILSREVAKEIEEKMQYPGQIKVTVIRETRAIEYAK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgccattaccaataacaattttactgattattattttttcttttctagctttttttgtt
gcctatttttatggaagttcaatatttaagaaaaaatatggagaacttagtgagcttgaa
ttaagaatagttgatgctaaaagaagactggagtcttctaaaaaagaagttgaaagagaa
atagaatcatttaggaaagaagaaacacttaaagtaaaggaagaattactgaatgaaaag
aaaattgccgatgatgaaataaagaaaatgaaatcggaaattgtttctaaagaagaaaga
atagcaaagaaagaagaaatacttgaaacaaaaacagaaagacttgaagacaaagaagca
aaaatggagaaacagcgtgaaaaacttgtgagaaaagaaactgagctgaatgagctaatt
tcaaaggaagaaaaagagcttgaaagaatttctgaacttacaaaggaagatgctgcaaaa
ataattcttacaaaacttgaaaatcagcttgaccatgacaaagcgattcttataagggat
tttgaacataatcttgacagggaaaaggacagaatttcaaaaaggattatatcaactgca
attggaaaggcttctgctgattacgttgtagattcaacaatttcagttattcagcttcct
agtgaggaaatgaaaggtagaataattggaagagaaggaagaaacataagggcaatagaa
gcggcaacaggagttgaccttataatagatgatacccctgaagcagtagttctttcatca
tttgatggtgtaagaagggaagttgcaagaattgcactggaaaaacttatttctgatgga
agaatacaccctacaaaaatagaggaagtagtcgcaaaagcacaggaagaagtggaggaa
agtgtacttgatgcggcagaacaggctatattggaagttggaataccaacacttccaaga
gaagtattgaaggtatttggaagattaaaattcagaacatcttttggacagaatatatta
cagcattcaatagaagttgctcacatagctgcggctttggcggcagaaataggagccaat
gttgatgtagctaagagggcaggactacttcatgatataggaaaagctttttctcatgag
caggaaggatcacatgcaataaatggtggagaattcctgagaaagttctctaaagaaaat
gaaatagttataaatgcagtagaatcacatcataatgaagtagaacagttaagtgtggaa
gctgtacttgtacaggcggctgactcaatttcagcatcaaggcctggagcaagaagagaa
acattatctaattatctgaagagacttgaacagcttgaagagattgcgaacagccatgaa
ggaattgaaagttcatatgcaattcaggctggaagagaactgagactgattgtccatcct
gatgaaattgatgatgacagggcaatgatactttcaagagaagttgctaaggaaatagaa
gaaaaaatgcagtatcctggacagataaaggttacagtaattagagaaacaagagcaata
gaatatgcaaaataa
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