Leptotrichia sp. oral taxon 212: AMK43_07480
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Entry
AMK43_07480 CDS
T04044
Symbol
polC
Name
(GenBank) DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
leo
Leptotrichia sp. oral taxon 212
Pathway
leo03030
DNA replication
leo03430
Mismatch repair
leo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
leo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMK43_07480 (polC)
03430 Mismatch repair
AMK43_07480 (polC)
03440 Homologous recombination
AMK43_07480 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
leo03032
]
AMK43_07480 (polC)
03400 DNA repair and recombination proteins [BR:
leo03400
]
AMK43_07480 (polC)
Enzymes [BR:
leo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMK43_07480 (polC)
DNA replication proteins [BR:
leo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMK43_07480 (polC)
DNA repair and recombination proteins [BR:
leo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMK43_07480 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
HHH_6
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
HHH_3
DEDDh_C
Zn_ribbon_8
tRNA_anti-codon
YhfH
Zn_Ribbon_TF
Urocanase_N
Motif
Other DBs
NCBI-ProteinID:
ALA95880
UniProt:
A0A0K2JBC4
LinkDB
All DBs
Position
complement(1619165..1623475)
Genome browser
AA seq
1436 aa
AA seq
DB search
MSAKYLKLKPSNDFTAKYDMKSFRIEHVNLFSKKKEIEIHVKVNNYNANEELADLRKLMH
KSFGTDLKLSIKITVETETLESDINGFIRFIIDNYKSESARHQYIFANYEVDNIEDNIFI
KLPSEHLIEHGRNSDILSELKQRIYNTTGKNFNLEFTSGDFEEIHKMIEEKKRNLEKAVK
VEELPVFEPPKEETKEKWNGNKGNTVHSDYRKKVADRKTSEFKVLDSLNLNEEVALEGHI
FHIDISETKNGNIKCDFIITDYTDSIGCRIFLKNAGELKIGLNDWVKVIGRFEIDRFTGE
HYINAKKIDKIEPKMTERKDNAEKKRIELHAHTNMSEMSGVVSAKDLAKRAKEFGHEAIA
VTDFGVVHSFPFAYKESNENFKIIFGMEAYVVDDEQDMITKPSDKLIEEEVYVVFDIETT
GLDPYNDKIIEIGAIKLKGKEIIDEFSVFINPEMNIPEEITRLTNITDDMVKDADNIETV
LPEFLKFCKDTTVVAHNAKFDVGFINQKAKNQGLEYSPSVIDTLHWARVLLHDQKRFGLK
NIANYFNISLDNHHRAVDDAKATAEIFQKFLNMVLSKGILKLTEISRELETNIQNAETLN
TMILVKNQEGLRDLYELVSRSHIEFFGNRKPRIPKSLLNEKRENLLIASSASAVFGNNGE
LANMFIRGSDLNDIEERAKFYDYIEIHPLTNYIDLEGTGDVESLDKIVEMNNYFYDLGKK
LGKIVVATGDAHYLEEREAINRSVLILGSGMGRRIFSYDKRLFLRTTDEMLEEFSYLGEE
KAYEVVVENTHKINDMIENVRPIPTGFYPPKIEGAEEEVRQMTYTKLNELYGKNVPEHLK
ERIEKELNSIIGNGFAVLYLIAQKLVKKSLDNGYLVGSRGSVGSSIVAYLMGITEVNGLY
PHYRCPNCKHTEFMEFEGSGPDLPDKVCPECGTQYIKDGHAIPFEVFMGFDGDKVPDIDL
NFSGEYQGEIHKYTEELFGSENVFRAGTIATLAEKNAFGYVKKYFEEVEGTPEISKRKAE
LTRIAKGCEGARKTTGQHPGGMIVVPADKSIYDFCPIQRPANDMNAESKTTHFDYHVMDE
QLVKLDILGHDDPTTLRILQDLTGVDIYSIPLDDEKVMSLFSGTEALGVTPQDIDSKTGS
SGIPEFGTSFVKQMLMDTKPKTFAELVRISGLSHGTDVWLNNAQEYVRQGIATLSEIITV
RDDIMNYLIDNGLDKSVAFTIMEFVRKGQPTKNPEKWKEYSEIMKKHKVKQWYIDSCEKI
KYMFPKGHAVAYVMMAVRIAYFKVYYPLEFYTAFLNRKAADFKMTAMFKSVDELKKAKRE
LDARGNLNAKEKQELFLYEILIEMHYRKIELMQIDIYKSEATHFTIEDGKIRMPLIAMDG
LGEAVAVNVVNERKEGEFLSVEDLVKRTKLNKTVMDLLKTYNCVPELSATNQQTLF
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaagtatttaaaattaaagccgtcaaatgattttacggcaaagtatgatatg
aaaagttttagaatagagcatgtaaacctgttttcaaaaaagaaagaaatagagatacat
gtaaaagttaataattacaatgcaaatgaagaactggctgatttacgtaagctgatgcac
aaaagttttggtaccgatcttaagctcagcataaaaataacagttgaaacggaaactctt
gaaagtgatataaatggctttataagatttatcattgataattataaatctgaaagtgca
agacatcagtatatttttgccaattatgaagtggataatattgaagataatatctttata
aaacttccgtcagaacatctgatagaacatggaagaaattctgatatactgagtgaactg
aaacagagaatatataatactacaggaaaaaatttcaatctggaatttacaagtggagat
tttgaagaaattcataaaatgatagaagaaaagaagagaaatctggaaaaagctgtgaaa
gtggaagagctccctgtatttgaacctccaaaggaagaaacaaaggaaaaatggaatgga
aataaaggaaatacagtacatagtgattacagaaaaaaagtggctgacagaaaaacaagt
gaattcaaagtgcttgacagcttaaacctgaatgaggaagttgcacttgaagggcatatt
tttcatatagatatttcagaaacaaaaaatggaaatataaaatgtgacttcataattact
gattatacagattccataggttgcaggatttttcttaaaaatgccggagaattgaaaata
ggtctgaatgactgggtaaaagtaataggaagatttgaaatagacagatttaccggagaa
cactatataaatgcaaagaaaattgacaagatagagcctaaaatgacagaaagaaaggac
aatgccgaaaagaaaagaatagagcttcatgcccatacaaacatgagtgaaatgagcgga
gtggtttctgcaaaggatcttgcaaagagggcaaaggaatttggacatgaggcaattgca
gttacagattttggagtagtgcattcttttccatttgcatataaggagtcaaatgaaaat
tttaaaataatttttggaatggaagcctatgttgtcgatgatgagcaggatatgataacg
aaaccatctgataagctgatagaagaagaagtttatgttgtatttgatatagaaacaaca
gggcttgatccttataacgataaaataattgaaattggagcaattaaattaaaagggaaa
gaaataatagatgaattttctgtgtttataaatcctgaaatgaatattccggaagaaatt
acaagacttacaaatattacagatgatatggtgaaggatgctgataacattgaaactgtg
cttcctgaatttttgaaattctgtaaggatactacggttgtggcacataatgccaagttt
gatgtgggatttatcaaccagaaggctaaaaatcaagggctggaatactctccaagcgtt
atagatacactacactgggcaagagtgcttctgcatgaccagaagagatttggtcttaag
aatatagccaattattttaatatttcccttgataatcaccatagggcagtagatgatgca
aaggcaacagctgaaatatttcagaaatttctgaatatggtgctgagtaagggaatcctg
aaacttacagaaataagcagggaactggaaacaaatatccagaatgcagaaacgcttaat
acaatgatacttgtaaaaaatcaggaaggactaagggatctttatgagcttgtatcaaga
agccatattgaattttttggtaacagaaaaccaagaatacctaaatcattgttaaatgaa
aagagggaaaatcttctgattgcaagttcggcatcggcagtatttggaaataacggtgag
cttgcaaatatgtttatacgtgggtcagatttgaatgatattgaagagagggcaaaattt
tatgattacattgaaatacatcctctgacaaattatattgacctggaaggtactggagat
gttgaaagtcttgataaaattgtggaaatgaataattacttttatgaccttggtaaaaaa
cttggaaaaatagtagtagctacaggagacgcccattatctggaagaaagggaagcaatt
aaccgtagtgtgcttattttaggaagcggaatgggacggcgtatattttcttatgataaa
aggctatttttaagaacaacagatgaaatgctggaagaattttcatatttaggagaagag
aaagcatatgaagtagttgtagaaaatactcataaaataaacgatatgatagaaaacgta
agacctattcctacaggattctatcctccgaaaatagaaggtgcggaagaggaagtaaga
cagatgacttatacaaaactgaatgagctgtatggaaaaaatgttcctgagcatctgaag
gaaagaatagaaaaggagctgaattcaataataggaaatggatttgcagttctttatctt
atagcccagaagcttgttaagaagtctcttgataatggatatttagtagggtcaagagga
tcggtagggtcatccattgtggcatatctgatgggaataacggaagtgaacggactttat
ccacattacagatgtcctaactgtaaacatactgaatttatggagtttgaaggaagtggg
cctgacctgcctgataaagtgtgccctgagtgcggaactcaatatataaaagatggtcac
gcaataccttttgaagtatttatgggatttgacggtgacaaggttcctgatattgatttg
aacttttcaggagaatatcagggtgaaatacataaatatacggaagaactgttcggttca
gaaaatgtattcagggcagggactatcgccactcttgcagaaaaaaatgctttcggatat
gtgaaaaaatattttgaggaagtagaggggacacctgaaataagcaaaagaaaagctgaa
cttacaaggattgcaaaaggatgcgagggagcaagaaaaacgacaggacagcatcccgga
ggtatgattgtagtgccggctgataagtccatatatgacttctgccctattcagagaccg
gcaaatgatatgaatgccgagtccaagacgactcactttgactatcacgtaatggatgaa
cagcttgtaaagcttgatatactgggacatgatgatccgactacattgagaatactgcag
gatttaacaggagtggatatttacagtattccacttgatgatgaaaaggttatgagcctg
ttcagtggaacagaagcacttggtgttacacctcaggacattgattctaaaacaggatcg
tcaggaatacctgaatttggtacatcgtttgtaaaacagatgcttatggatacgaagcct
aagacatttgcggaattagtaagaatatcaggactttcccatggaactgatgtatggctg
aataatgcacaggaatatgtaagacagggaattgctaccttaagtgaaataataacagtc
cgtgatgacattatgaactatctgattgataacggtcttgataaatcggttgcctttaca
ataatggaatttgtcagaaaaggtcagcccactaaaaatcctgaaaaatggaaagaatat
tcagaaataatgaaaaaacataaagtaaagcagtggtatattgattcgtgtgaaaagata
aaatatatgttccctaaaggtcacgctgttgcttacgttatgatggctgtgagaatagct
tattttaaagtttattacccgcttgaattttatactgcattcctgaacagaaaggcagct
gattttaaaatgactgcgatgttcaagtctgtagatgaactgaaaaaagcaaaaagggaa
cttgatgcaagaggtaaccttaatgcaaaagaaaaacaggaactattcctatatgaaatt
ctgattgagatgcattatagaaaaattgagcttatgcagatagatatttataaatcagaa
gctactcattttactattgaagacggaaaaataagaatgcctctaattgcaatggacgga
cttggtgaagcagttgcagttaatgtcgtaaatgaaagaaaggaaggagaatttttgtca
gtggaagatctggtgaaaagaacaaaattaaataaaacagtgatggatttgttaaaaaca
tacaattgtgtgcctgaattatcagcgacaaatcagcagacattattttag
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integrated database retrieval system
