Leptotrichia sp. oral taxon 212: AMK43_09310
Help
Entry
AMK43_09310 CDS
T04044
Name
(GenBank) single-stranded DNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
leo
Leptotrichia sp. oral taxon 212
Pathway
leo03410
Base excision repair
leo03430
Mismatch repair
leo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
leo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AMK43_09310
03430 Mismatch repair
AMK43_09310
03440 Homologous recombination
AMK43_09310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
leo03400
]
AMK43_09310
DNA repair and recombination proteins [BR:
leo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AMK43_09310
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AMK43_09310
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AMK43_09310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ALA96172
UniProt:
A0A0K2JCL4
LinkDB
All DBs
Position
2013853..2016729
Genome browser
AA seq
958 aa
AA seq
DB search
MRNTKWNIKNIPKDKDIKINNIPVDKDILKILFSRGIKSPREIRDFLNPKLENLQNPDKL
YDMEKAVKIIRNAIQKNENIWIYGDYDVDGITSTAVLYLSLKELGAKNVSYYIPVRDEGY
GLNNDALKKIRDSDGELVITVDCGITAFEEIKFANSIDLPVIITDHHNLQGKKVPDALAA
INPKRVENEYTFESLAGVGTVFMLILSLFESYGRKNDAFEYLDLVSIGTIADIVPLLSEN
RILTKFGLEKLPFTKNRGLAFLLYKLFNNSENGGKSPKTEYSTYDVGFIIAPVFNAAGRL
KDAKMVVKLLTSDNNREIEIIVKELINKNFERKELQNRIVEMIEKNIEKNKINEDFIIID
YSPEYHHGIIGIAASKIVDTYYKPVIIMEVKEDEGIAVGSCRSIEGFNILNALQSMPELF
IKFGGHAGAAGFTIPIKNIELFKRKINEYAKKILKDDDFIKIINIDKQIPMQKMSYEFFK
TIELLKPFGFGNPMPTFQTKNILLENIKFIGENKNHIMFDLKQKGFIIKNAVWFGSGEYF
KELNENLFYDIVYKLKIEEFQDRYYTKAYIEDMKVSELRDDTLLYYHSLYNTSFPIKSIF
YTHLDLDGEMPLSLKNEFDQISLFQGRKFVGRLDYNISNLLIQLKRYFNWNFTVKVENII
KSSTHNIVDILIKRDFSFECYDYTDIGIFNRIKNFLIGNMEYDSFTKNLLSLFFRQNKDL
IVSFENKSSENFKNNPEKYIKPENLINFLLTVGIYFMKKTGKKSLIVVKNSKNSVYNIPF
IKAYFDIISKYEIEQDKKYPFILFYKTKFKQSIKKISPENFILPKIKEIEIGEENNKFTE
TEKNTLNKDNKINARFCFFTDAETKDEFISDFFESSNINNGEKKSEISNDFNVQTEFIKN
NISIPENIVFLNTLKKKDLKELKNIYVEYLPLEDKIRLKEKLDKGELLYSDYSVSEII
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatacaaaatggaatataaaaaatattccgaaagataaagatataaaaataaat
aatattcctgtagataaagatatattgaaaatactattttccagaggaataaaatctccc
agggaaataagggattttttaaatcctaaactggaaaatcttcagaatcctgataaactt
tatgatatggaaaaagctgtcaaaattattagaaacgctatccagaaaaatgaaaatata
tggatatatggcgactatgatgttgacggaattacatcaaccgctgtactgtatctttca
ctgaaggaactgggtgctaaaaatgtcagttactatatacctgtcagggatgaaggatat
ggacttaataatgatgcactgaaaaaaatcagagattcagatggagaacttgtcattacc
gtagattgtggaattacagcttttgaagaaataaaatttgcaaattcaatagatcttccg
gttataataaccgaccatcacaatttacaaggaaaaaaagttcctgatgcactggcagcc
attaatcctaaaagagtggaaaatgagtatacatttgaatctcttgcaggtgtaggaaca
gtattcatgcttattctgtcactctttgaaagctacggaagaaaaaatgatgcctttgaa
tatctggatcttgtatctataggaactattgccgatattgttccacttttatcagaaaac
cgtattctcacaaaatttgggctggaaaaacttccctttactaaaaacagaggacttgct
tttttactttataaattatttaataatagtgaaaatggcggaaagagcccaaagacagaa
tattcaacttatgatgtcggtttcataattgctcctgtatttaatgccgccggacgtctt
aaagatgcaaaaatggtagtgaagcttctgacttctgacaataacagggaaatagaaatc
atagtaaaagaacttattaataaaaattttgagagaaaagaacttcagaacagaattgtg
gaaatgattgaaaaaaatatcgagaaaaataaaatcaatgaagattttataattattgac
tactctcctgaatatcatcatggaatcataggaattgcagcttctaaaatagtcgacaca
tattataagcctgtcattattatggaagtcaaggaagatgagggaatcgcagtcggctca
tgtagaagtatagaaggtttcaatattttaaatgccttacagagcatgcctgaattattt
atcaaatttggtgggcatgcaggagcggcaggatttacaattccgataaaaaatattgag
ctatttaaaagaaaaattaatgaatatgcaaaaaaaattctgaaggatgatgattttatt
aaaattataaatattgacaaacagattccgatgcaaaaaatgtcctatgaattctttaag
acaatagaactgcttaaaccatttggttttggaaatccaatgcctacctttcagactaag
aacattcttctggaaaatataaaatttataggggaaaataagaatcatattatgtttgac
ctgaaacagaaggggtttattattaaaaatgctgtctggtttggatcaggggaatacttt
aaggagctcaatgaaaatctgttttatgatattgtatataaactaaagatagaagaattt
caggacagatactataccaaagcctatatagaggacatgaaagtttctgaactgagggac
gataccttattatattatcattccctctacaatacttcttttcctattaaatcaatattc
tacacgcatcttgatcttgatggggaaatgcctctcagtctgaaaaatgaatttgatcag
atttcactttttcaggggagaaaatttgtaggaaggcttgactataatatttcaaatttg
cttattcagctgaaaagatattttaactggaatttcactgtcaaagttgaaaatataata
aaatcttcaacacataatatcgtagacatacttattaagagggatttttcgtttgaatgt
tatgattacactgatattggaatttttaacagaataaaaaattttctcataggaaatatg
gaatatgatagttttacaaaaaatctgctttcactgtttttcagacaaaacaaagattta
atagtttcctttgagaataaatcttcagaaaattttaaaaataacccggaaaaatatata
aaacctgaaaatctgataaattttcttttgactgtaggaatatattttatgaaaaaaaca
ggtaaaaaaagtcttattgttgtaaaaaatagcaaaaactctgtatataatattcctttt
ataaaagcatactttgacatcatttcaaaatatgaaattgaacaggataaaaaatatcct
tttatactgttctataaaacaaaatttaaacagagtataaaaaaaatatctcctgaaaat
tttattctccccaaaataaaagaaattgaaataggagaggagaataataaatttacagaa
acagaaaaaaacactttaaacaaggacaataagattaatgcacgattctgttttttcact
gatgctgaaacaaaagatgaatttatttcagatttttttgaaagcagtaatataaataat
ggtgaaaaaaaatctgaaattagtaatgattttaatgttcagacagaatttattaaaaat
aatatttcaatacctgagaatattgtatttttaaataccctgaaaaagaaagatttaaaa
gaactgaaaaatatatatgttgaatatctgccactggaagataagataaggcttaaagaa
aagttggataaaggggaattactgtattctgattattccgtttcagaaataatataa
DBGET
integrated database retrieval system
