Leptolyngbya sp. PCC 7376: Lepto7376_1507
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Entry
Lepto7376_1507 CDS
T02361
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
lep
Leptolyngbya sp. PCC 7376
Pathway
lep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Lepto7376_1507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lep03019
]
Lepto7376_1507
03009 Ribosome biogenesis [BR:
lep03009
]
Lepto7376_1507
Enzymes [BR:
lep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
Lepto7376_1507
Messenger RNA biogenesis [BR:
lep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Lepto7376_1507
Ribosome biogenesis [BR:
lep03009
]
Prokaryotic type
rRNA processing factors
Lepto7376_1507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
AFY37850
UniProt:
K9PWK6
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All DBs
Position
1702159..1704285
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AA seq
708 aa
AA seq
DB search
MPKQIIIAEQHQIAAVFWEDQIQEIVVSTGAQQVGDIYLGVVENVIPGIDAAFINIGDSE
KNGFIHVSDLGPIRLRKNSSSITELLEPQQKALVQVMKEPTGNKGPRLTGNITMPGRYVV
LMPYGKGVNLSRRISNDNERSRLRALAVLMKPPGMGLLVRTEAEGTDEDSIIEDLESLQK
QWESIQQQANYGRPPMLINRDDDFIQRVLRDIYSDEVNRIVVDSSSGVKRVKNQLMNWQG
GKTPDGLLIDHHREKQNILEYFRVNGAIREALKPRVDLPSGGYIIMEPTEALTVIDVNSG
SFTKSATARETVLWTNFEAATEIARQLRLRNIGGVIVVDFIDMDSRRDQLKLLEHFTRIL
KADKARPQIAQLSELGLVELTRKRQGKNLYELFGTPCSHCNGLGHLAHLPGEEHPSGLQI
GNILPVSTQSSSTDGRPTLTNRTVSSGNNGRNDSRSKSSSAANESLDLLNHPDYQEQNNS
GNRRRRRRSPEVSAKPVLRDPNEKDTESPENEIKSVSKSKESKDNNSNGSNGNSSKNGNS
GRYDRRGRYRREEIKYETVQVEMTPEEQNVYALIGVSPLVKITGGDEKDPRSTIVKVVRP
GEAVEIPVEESSVATATLVKAEPEVSETSVPVESESEPKDADTEPQVVDKPTVKEISKLV
SESDAKNENVTSAPEAVVEEKSVESEPESEPEQKIVRRRRRRRSSASE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcaaattatcattgcagagcagcatcagattgctgccgttttttgggaagac
caaatccaagaaatcgtcgtatccacaggtgcccaacaagttggtgatatctatctcggg
gttgtcgaaaacgttatccccggtattgatgctgctttcattaatattggtgattctgag
aagaatggttttatccatgtcagcgacctgggtccaatccgccttcggaaaaattctagt
tcgatcaccgagctactagagccacagcagaaggctttggtacaggtgatgaaggaaccg
acgggcaataaaggccctcgactaacgggcaatatcaccatgcctggccgctatgtggtt
ttgatgccctatggcaaaggcgtgaatttatcgcgccgtattagcaatgataatgagcgt
agtcgtctgcgtgccctcgccgtattgatgaaacctcccggtatgggtctattggtgcgt
actgaggctgaaggtactgatgaagattctattattgaagatttagaatctctacaaaag
cagtgggaatcgattcaacagcaggccaattatggtcgcccaccgatgctgattaatcgt
gatgatgatttcattcagcgggtattgcgagatatttacagtgatgaagttaatcgaatt
gttgttgactcttcgagtggtgtgaagcgtgtaaagaatcagttgatgaactggcagggt
ggtaaaacacctgatggtttattgattgaccaccatcgtgaaaagcaaaatattcttgaa
tatttccgggtgaatggcgcgattcgtgaggcattgaaaccccgtgttgatctgccttct
ggcggctatatcatcatggaacccacagaggcattaacagttattgatgttaactctggt
tcctttacaaaatctgccacagctcgtgaaactgttttgtggacaaactttgaggccgcg
acagaaattgcccgtcagcttcgcctaagaaacattggcggcgtgatcgttgtggacttc
attgatatggattcacgacgagatcagttgaagctactagagcatttcaccagaattttg
aaagcggataaggcgagaccacaaattgcgcagctctcggaattgggtttggtggaacta
actcggaagcgtcaaggcaaaaatctctatgaactatttgggacaccctgttctcactgt
aatggcttgggtcatctggctcatttgccaggtgaagagcatccgtctggtttacagatt
ggaaatattttaccggtttccactcagtcttcttcgacagatggtcgtcctacattgacg
aaccgtacggtatcttcgggcaataatggtcgtaatgattctcgttcgaaatcttctagt
gcggccaacgagtctttagatctccttaaccacccagattatcaagagcaaaataatagt
ggtaaccggagacggcggcggcgatcgcctgaggttagtgctaagccagttttacgtgat
cctaatgaaaaggatacagagtcgccagaaaatgaaattaagagcgtatccaaatctaag
gaatctaaggataataattccaacggatccaatggcaactcttcaaagaatggcaactct
ggtcgttatgatcgtcgtggtcgttaccgtcgtgaagaaatcaagtatgagactgttcag
gtggagatgactcctgaagaacaaaatgtttatgctctcattggtgtatctcccctggtg
aagattactggtggtgatgaaaaagatccgcgctcaacgattgtgaaagtggttcgcccc
ggtgaagcggtggaaataccagtggaagaatcatccgttgcaacggcaacgttggttaag
gcagagccagaagtttctgaaacatcagtgcctgtcgaatctgaatctgagccaaaagat
gcagacactgagcctcaggtggttgataagccgacagtcaaagagatttctaagctcgtc
agtgagtctgatgcaaagaatgaaaatgtgacttctgcaccagaagctgtagtcgaggag
aaatccgtagaatctgaacctgagtctgaacctgaacaaaagattgttcgtcgtcgtcgt
cgtcgtcgttcttctgcctcggagtaa
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