Leptolyngbya sp. BL0902: GFS31_22830
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Entry
GFS31_22830 CDS
T10598
Name
(GenBank) iron ABC transporter substrate-binding protein
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
lepb Leptolyngbya sp. BL0902
Pathway
lepb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lepb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFS31_22830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lepb03019
]
GFS31_22830
03016 Transfer RNA biogenesis [BR:
lepb03016
]
GFS31_22830
Enzymes [BR:
lepb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
GFS31_22830
Messenger RNA biogenesis [BR:
lepb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GFS31_22830
Transfer RNA biogenesis [BR:
lepb03016
]
Prokaryotic type
tRNA degradation factors
GFS31_22830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
RNase_II_C_S1
OB_HELZ2
Rrp44_S1
Motif
Other DBs
NCBI-ProteinID:
QQE65595
LinkDB
All DBs
Position
complement(2436317..2438698)
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AA seq
793 aa
AA seq
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MEFSIAALLASFGKDKTLTLKHLEKKLHCTTDTSQRDLQIAVDALERIGVLVKERGKYRR
NSEDGVVEGKLRCSSKGFCFAIQDEEGAEDIYVRESHLNTAWNGDRVLVRVTKEGSGRRS
PEGEVRLILERANASVLARVKQEAEDYRAVPLDDRLLFELSLLANGGNLNEAVDQLAHVE
IVRYPLGQNPPQGRVAQILGSDAEAASDLDIVHCKHDLPRQFSDRVLAEAEALPTRLGKT
ALKDRLDLREALTLTIDGPNASVMDDALTLDRTEAGHWRLGVHISDITHYIPAHSAIDQE
AARRGTSVYLGDTVIPMLPPPLSGSLGSLEVGKDRLTLSMLATLDDTGHVLEYEIRPSVV
NVNYHVTYQEAQAVLERDNPDALSTLGVDAKALKKLAPIYDLLDNLLYLSQAIKRQRLHR
GSFELNLPEYDFPADAEEPLAHYRSPKFQYDDEGLLGVMVVSAGVSSRPLVTECMLLANQ
LVAQHLVALGVPAIYRLHRAPDPNDVQELTKLAENMDIQLTLEAEDAPQPKDYQRFVEQF
ADSSAEKILTYLLLETIQPAFYSTHPSQHFGLGLAEGYTHFTSPSRRYADLVVHRILHAV
FESGRDRRSTRSKDGVDLHHSACHGQISWNVLPPEIQHDLEDDLPRLAIHLTERERLAQE
AESDLEGLKKAEFMRSHTGEVFHGLITGVQSYGFFVEIEELLVEGLVHVSSLKDDWYEYR
ARQQKLVGRKNRQQYRLGDKVDVQVKSVDYYRQQIDLVAVGGGSQMPDDEENPAYDEDAP
ETAGSDLSSDESE
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggaattttcgattgcggcattactcgcgagttttggcaaagacaaaacccttaccctg
aaacacctcgaaaagaagctccactgcaccaccgacacgagtcagcgagacttgcagatt
gccgtagacgccctagaacgcattggggtgttggtgaaagagcggggtaaatatcggcgc
aactctgaggatggcgtggtggaaggcaagctgcgctgttccagcaaaggcttttgcttt
gccatccaagatgaggaaggggccgaagatatctacgtgcgggaaagccacctgaatacc
gcctggaatggtgatcgagtgctggtgcgcgtgaccaaagaaggcagcggacgacgcagc
cccgaaggtgaagtgcggctgatcttagaacgggcgaatgcctcggtgttggcccgcgtc
aagcaggaagcggaagactaccgggcggtgcccctggatgatcggctgctgtttgaactg
tctttgttggccaatggcggcaatctaaacgaggccgtcgatcaactggcccacgtagaa
attgtccgctatcccctcggccaaaaccctccccaggggcgggtggcgcaaattttgggc
agcgatgctgaagcggcctccgacctcgatatcgtccactgcaagcacgacctgccccgc
cagttttctgatcgggtgctggcggaagccgaagccctgcccacccgcctaggcaaaacg
gccctcaaggatcgtctagacctgcgcgaggccctcaccctcaccattgacggccccaac
gcctcggtgatggacgatgccctcaccctcgacagaaccgaggcgggccactggcggctg
ggggttcacatctccgacattacccactacatcccggcccattccgccattgatcaagag
gcggctaggcgcggtacctcggtgtatttgggcgatacggtgattcctatgctgccgccg
ccgctgtcgggtagcttgggttccctggaggttggtaaggatcggctcaccctgtcgatg
ctggccaccctagacgataccgggcatgtgctggagtacgaaattcgcccctcggtggtg
aatgtgaactatcacgtcacctaccaagaggcccaggctgttctagagcgggataaccct
gacgcgctcagcaccctaggggtagacgcgaaggccctgaaaaagctcgcccccatctac
gatctcctagacaatctgctctacctcagccaagccatcaagcggcagcggctccatcgc
ggatccttcgagctcaacctaccggagtacgacttccccgccgatgccgaagaacccctg
gcccactaccgctctcccaagttccagtacgacgacgagggcttgctgggcgtcatggtg
gtgtcggcaggggtgtcttcccgccccctggtgacggaatgtatgctgctggcgaatcaa
ctggtggcccaacatctggtagccctgggcgttccagccatctatcgactgcaccgcgcc
cccgaccccaacgacgtgcaggaactcaccaagctggcggaaaacatggacatccagctc
accctagaagccgaagatgcgccccagcccaaggattatcagcggtttgtggagcagttt
gccgactccagcgccgagaaaatcctcacctacctgctgctcgaaaccatccagcccgcc
ttctatagcacccatccctcccagcactttggcctgggcttggccgagggctacacccat
ttcacctccccttcccgccgctatgcggatttggtggtgcatcgcatcctccatgcggtg
ttcgagtcgggccgagatcgtcgctccacccgatctaaggacggtgtggatttgcaccat
agcgcctgccacggtcaaattagctggaatgtgctgccccccgaaattcaacacgatcta
gaggacgacctaccccgccttgccatccacctgaccgaacgggaacggctggcccaggag
gccgaatctgacctagaggggctgaaaaaggccgaatttatgcgctcccacacgggggaa
gttttccacgggctgattacgggcgttcagtcctacggcttctttgtggaaatcgaagag
ctgctggtggaagggctggtgcatgtcagctccctcaaggacgactggtatgagtatcgc
gcccgtcagcaaaaactggtgggccgtaaaaaccgccagcaataccgccttggcgacaag
gtagatgtgcaggtgaagagcgtcgattactatcgtcagcagattgacctagtggccgtg
ggtggcggcagtcaaatgcccgacgacgaagaaaaccccgcctacgacgaggacgcccct
gaaaccgctggatctgaccttagcagcgacgagagcgaatag
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